BS28530.complete Sequence
626 bp assembled on 2012-03-26
GenBank Submission: KX804132
> BS28530.complete
GAAGTTATCAGTCGACATGCGTTGTATGCTTATAGTATTTGCCATAGCTG
CTGTAAGCCTTTCGTGTGCTGCTCCTGCGAAATCGCAAAACGAGATGTTA
GCTCATTTCTTTGACTATGCTGACACCCTCCGTGGCATTCAAATCCATAA
TATGATGTCACTCACCATCAAATTCGTGCAACAAGTTGTGGACACAGTTC
CGCTTGAACAACGTGGACCGGGAACGGCTGCCCTCCAGGCCTATGCCAAC
AAGGGCAAGAGTCTCAAACAGCGAGGCACAACTGGCGAGAAATATAACTA
TATCTACGAACTGCAACAGGTATTCGAGGGACTCAACAGCGAGCTGAGTC
AATCGGCACCTGAATCCCAGGTGATTGGAATGAGCCTGCTGGGTTTACTG
GGCGTTAGCACTGAATTCGCCAATGAGAATGAGAAACTCCACAATAAGTT
TGTCGAAGGTGCCACCCAAATGAAAGCCATGTTGTCTCCGACCACAATAG
CTCGGGAAAGTGAGCTCCTCGAGGCGATCGACAAATACATCGCTTCCACT
GATATACAGCAGCACGAAGCTCTCTTTATGAAAGTCATGAGCTTCAAGGA
TAGGTACTAAAAGCTTTCTAGACCAT
BS28530.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:08:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13962-RB | 459 | CG13962-PB | 1..459 | 152..610 | 2295 | 100 | Plus |
| CG13962-RA | 459 | CG13962-PA | 1..459 | 152..610 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:08:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13962-RB | 769 | CG13962-RB | 21..614 | 17..610 | 2970 | 100 | Plus |
| CG13962-RA | 651 | CG13962-RA | 21..614 | 17..610 | 2970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19813859..19814413 | 610..56 | 2775 | 100 | Minus |
| 2L | 23513712 | 2L | 19814474..19814512 | 55..17 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:08:10 has no hits.
BS28530.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:12 Download gff for
BS28530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13962-RA | 25..616 | 17..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:50 Download gff for
BS28530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13962-RA | 21..612 | 17..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:34 Download gff for
BS28530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13962-RA | 21..612 | 17..608 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:34 Download gff for
BS28530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19813861..19814413 | 56..608 | 100 | <- | Minus |
| 2L | 19814474..19814512 | 17..55 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:50 Download gff for
BS28530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19813861..19814413 | 56..608 | 100 | <- | Minus |
| arm_2L | 19814474..19814512 | 17..55 | 100 | | Minus |
BS28530.pep Sequence
Translation from 16 to 609
> BS28530.pep
MRCMLIVFAIAAVSLSCAAPAKSQNEMLAHFFDYADTLRGIQIHNMMSLT
IKFVQQVVDTVPLEQRGPGTAALQAYANKGKSLKQRGTTGEKYNYIYELQ
QVFEGLNSELSQSAPESQVIGMSLLGLLGVSTEFANENEKLHNKFVEGAT
QMKAMLSPTTIARESELLEAIDKYIASTDIQQHEALFMKVMSFKDRY*
BS28530.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13962-PB | 152 | CG13962-PB | 1..152 | 46..197 | 756 | 100 | Plus |
| CG13962-PA | 152 | CG13962-PA | 1..152 | 46..197 | 756 | 100 | Plus |
