BS28533.complete Sequence
626 bp assembled on 2012-03-26
GenBank Submission: KX804540
> BS28533.complete
GAAGTTATCAGTCGACATGTCATTTCCTCGGATCATTTTTTTCCTTGTGT
TGCTGGCATTTGCCAGGAGTGATCCTGTTGAAAGGAATACGGAAGCCATT
TGCCAGTTTTTCCAACACGTTCGAGCGTTTCAAGCAGACTGGTGGGAGGA
CTCAGTTATCCTGATGAAGAGAATGTTGGAGGAAATGGTCAATGCCCTAG
AGCCCTATATCGAATATGCAGAGTACAGGAAAACCATGCAGGACTATCTC
GAGCATGGAAAGACCATAGTTACGTCCAGTCGTTTGGAAGATAAGATGGC
ATTTGTTCAAGGATTCAATGAACACGGTGACCAGCCAACTCTAGTCGGAT
CACCCTCCAAGAGGCAGGCGCTCACCAGACCTCTAAACCATTTCCAATCG
AATATGATTTCCAAAGTGTTCACTGAGTTCCATAAAAAACTGATCAAAGC
TGCTGACGACTTGGAGCGAGTAGTGCGATTCCCGGATAACTCTGCTAGGG
GGGAACTTTTTGGGCTTCTCGAGCAATATCGGGCCAGTGGTATTGGAAGT
ATGACTGAAGAGATAGCTTCTCGAATCCTGGCGCTAAAGGATAATTACCA
GTGTGCCTAGAAGCTTTCTAGACCAT
BS28533.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:08:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31606-RB | 594 | CG31606-PB | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:08:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31606-RB | 690 | CG31606-RB | 20..614 | 17..611 | 2975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:08:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8147724..8148280 | 55..611 | 2785 | 100 | Plus |
2L | 23513712 | 2L | 8147630..8147669 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:08:17 has no hits.
BS28533.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:13 Download gff for
BS28533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31606-RB | 1..594 | 17..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:55 Download gff for
BS28533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31606-RB | 20..613 | 17..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:37 Download gff for
BS28533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31606-RB | 20..613 | 17..610 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:37 Download gff for
BS28533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8147630..8147668 | 17..55 | 100 | -> | Plus |
2L | 8147725..8148279 | 56..610 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:55 Download gff for
BS28533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8147630..8147668 | 17..55 | 100 | -> | Plus |
arm_2L | 8147725..8148279 | 56..610 | 100 | | Plus |
BS28533.pep Sequence
Translation from 16 to 609
> BS28533.pep
MSFPRIIFFLVLLAFARSDPVERNTEAICQFFQHVRAFQADWWEDSVILM
KRMLEEMVNALEPYIEYAEYRKTMQDYLEHGKTIVTSSRLEDKMAFVQGF
NEHGDQPTLVGSPSKRQALTRPLNHFQSNMISKVFTEFHKKLIKAADDLE
RVVRFPDNSARGELFGLLEQYRASGIGSMTEEIASRILALKDNYQCA*
BS28533.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31606-PB | 197 | CG31606-PB | 1..197 | 1..197 | 1016 | 100 | Plus |