BS28534.complete Sequence
515 bp assembled on 2012-03-26
GenBank Submission: KX804709
> BS28534.complete
GAAGTTATCAGTCGACATGGCACCCAATCGCAAGGACGGAAAGAAGAATA
TTACGGAAAAGCAGGAAGCGAAAATGTTAGCCGAAGCTGGTGGAAAATCG
GCCAGTGATAGCGATGCGAGCGATACCGAATGGCAAATGGTTCAATTTGT
GGACGATCCGAATGTCCTGCGAGTTGCGATCATAGCTTGTCCTGAGGTGA
CCTTGGGCTTTTTACTGTGTGGCGTTGGCTATCAGAAGGATAGATTTCGC
AACTATATGATGGTTGAGAGCGAGACGCCACAAGAGGATGTGGAGCAGTT
CTTTCTCACGGTTTACAGGAGATCCAATATCGGCATTGTCATCATCGACT
ACGATACGGTGAAAAGGCTTCGTACCATGATGCAACGATGTTCTCAGCTG
CTTCCCGTCCTGGTCACGGTGCCCAACAAATCCTCACTGATCACGTACTT
GGACAAAAAGGAGCGAAATCGGCGACTTCGCCAGCGTGATGCCTATTAGA
AGCTTTCTAGACCAT
BS28534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-RD | 483 | CG15719-PD | 1..483 | 17..499 | 2415 | 100 | Plus |
| CG15719-RC | 483 | CG15719-PC | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-RD | 747 | CG15719-RD | 70..552 | 17..499 | 2415 | 100 | Plus |
| CG15719-RC | 717 | CG15719-RC | 40..522 | 17..499 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13004150..13004377 | 499..272 | 1140 | 100 | Minus |
| X | 23542271 | X | 13004567..13004744 | 194..17 | 890 | 100 | Minus |
| X | 23542271 | X | 13004430..13004508 | 272..194 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:07:56 has no hits.
BS28534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:09 Download gff for
BS28534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RB | 1..483 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:43 Download gff for
BS28534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 40..522 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:28 Download gff for
BS28534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 40..522 | 17..499 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:28 Download gff for
BS28534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13004568..13004744 | 17..193 | 100 | | Minus |
| X | 13004150..13004376 | 273..499 | 100 | <- | Minus |
| X | 13004430..13004508 | 194..272 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:43 Download gff for
BS28534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12898183..12898409 | 273..499 | 100 | <- | Minus |
| arm_X | 12898463..12898541 | 194..272 | 100 | <- | Minus |
| arm_X | 12898601..12898777 | 17..193 | 100 | | Minus |
BS28534.pep Sequence
Translation from 16 to 498
> BS28534.pep
MAPNRKDGKKNITEKQEAKMLAEAGGKSASDSDASDTEWQMVQFVDDPNV
LRVAIIACPEVTLGFLLCGVGYQKDRFRNYMMVESETPQEDVEQFFLTVY
RRSNIGIVIIDYDTVKRLRTMMQRCSQLLPVLVTVPNKSSLITYLDKKER
NRRLRQRDAY*
BS28534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-PD | 160 | CG15719-PD | 1..160 | 1..160 | 820 | 100 | Plus |
| CG15719-PC | 160 | CG15719-PC | 1..160 | 1..160 | 820 | 100 | Plus |
