BS28535.complete Sequence
311 bp assembled on 2012-03-26
GenBank Submission: KX804908
> BS28535.complete
GAAGTTATCAGTCGACATGACTTTTGCAAGGTGGAACTGGACTATTTTCC
CGTGTATGATCCCGACGAGCTTTCCAATCTGGATGCGAATCTTTCAAAGC
CGGGCAATAGCACAAAACGCTCATATTATTCACCGCATCCTGAGGCCAGA
AGGTCGAATAGAACCGCTGAAAAACAATTTGTCAAAGATGTTCAACTACG
ATATTCTCATGGCTTACAACTGCGACGGTGAGCTCTCAGTCAGCAGTCAG
TCATCTCATACAAATATATTAACGAAACTATTTTTGGGGTCCTGAAAGCT
TTCTAGACCAT
BS28535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-RA | 279 | CG17977-PA | 1..279 | 17..295 | 1395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:08:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-RA | 966 | CG17977-RA | 212..492 | 17..297 | 1405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:07:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8067125..8067293 | 287..119 | 845 | 100 | Minus |
2R | 25286936 | 2R | 8067342..8067444 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:07:59 has no hits.
BS28535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:10 Download gff for
BS28535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 209..486 | 17..294 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:45 Download gff for
BS28535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 212..489 | 17..294 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:31 Download gff for
BS28535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 212..489 | 17..294 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:31 Download gff for
BS28535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8067125..8067293 | 119..287 | 100 | <- | Minus |
2R | 8067343..8067444 | 17..118 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:45 Download gff for
BS28535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3954630..3954798 | 119..287 | 100 | <- | Minus |
arm_2R | 3954848..3954949 | 17..118 | 100 | | Minus |
BS28535.pep Sequence
Translation from 16 to 294
> BS28535.pep
MTFARWNWTIFPCMIPTSFPIWMRIFQSRAIAQNAHIIHRILRPEGRIEP
LKNNLSKMFNYDILMAYNCDGELSVSSQSSHTNILTKLFLGS*
BS28535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-PA | 92 | CG17977-PA | 1..92 | 1..92 | 493 | 100 | Plus |