Clone BS28537 Report

Search the DGRC for BS28537

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:285
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG42597-RA
Protein status:BS28537.pep: gold
Sequenced Size:533

Clone Sequence Records

BS28537.complete Sequence

533 bp assembled on 2012-03-26

GenBank Submission: KX800811

> BS28537.complete
GAAGTTATCAGTCGACATGACCAGTCCCACGCCTGTTCTATTGGCCTTCG
TTGTGCACATGGTGCTCCACACAACGCTCTTCATACATCTAGATCCGGGT
ATAATTGCAGACACCCCCGTCTTTGGTAGCCAGTTATTCTATTTATCAGT
GATGGATCTGCTGTGCGACACAGAGGTAATACCCACGCACTGGAGTAACA
TTCCGCGGTGGGGAAAGTTTATCCTTGAGACCATTATCGCCATCCTTATT
GGCGAAACTTTGATGGTGGGCGTATGGCTTTCCATGGAAACGCTTCTCGT
CAACTTTATAAATGTTATAACCAATTGGTTGGGCCTGGGCAGCCGTACAA
ACACTAATTTCCAGGAGATCGGCACGATTTTATTGGGAGTTATCTTTTTA
GTGATAGTGGGTGCCATTACAAATCGACCGGCCAAAGTTTGGAAAATGGC
ACAACAGTCTTGGAGAATCATCACACAACAAAGTCGTCCTTCGTCCAAAC
AGAAATCTTTTAAATAAAAGCTTTCTAGACCAT

BS28537.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG42597-RA 501 CG42597-PA 1..501 17..517 2505 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG42597-RA 676 CG42597-RA 87..587 17..517 2505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:08:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22064693..22065193 517..17 2505 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:08:30 has no hits.

BS28537.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:15 Download gff for BS28537.complete
Subject Subject Range Query Range Percent Splice Strand
CG42597-RA 1..499 17..515 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:01 Download gff for BS28537.complete
Subject Subject Range Query Range Percent Splice Strand
CG42597-RA 87..585 17..515 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:41 Download gff for BS28537.complete
Subject Subject Range Query Range Percent Splice Strand
CG42597-RA 87..585 17..515 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:41 Download gff for BS28537.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22064695..22065193 17..515 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:01 Download gff for BS28537.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22064695..22065193 17..515 100   Minus

BS28537.pep Sequence

Translation from 16 to 516

> BS28537.pep
MTSPTPVLLAFVVHMVLHTTLFIHLDPGIIADTPVFGSQLFYLSVMDLLC
DTEVIPTHWSNIPRWGKFILETIIAILIGETLMVGVWLSMETLLVNFINV
ITNWLGLGSRTNTNFQEIGTILLGVIFLVIVGAITNRPAKVWKMAQQSWR
IITQQSRPSSKQKSFK*

BS28537.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG42597-PA 166 CG42597-PA 1..166 1..166 859 100 Plus