Clone BS28551 Report

Search the DGRC for BS28551

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:285
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptwuho-RA
Protein status:BS28551.pep: full length peptide match
Sequenced Size:1307

Clone Sequence Records

BS28551.complete Sequence

1307 bp assembled on 2012-04-06

GenBank Submission: KX805068

> BS28551.complete
GAAGTTATCAGTCGACATGTGCACAACAATTTCGTTCGCGGAACCCGAAA
TCGTGCTCGGCCATGGCCGCAGGGTGCTCTTCGTGAACCCCGACGACCTG
CAGATATTCAAGGAGATCGAGCTGCCGCCCGACCTTGGCCTGAAAGGCCA
TACATCCCAGTCGCAGGAATCGTGTACAGCCGCAGCAGCCGCATCCACAG
CCACAGCCGCATCCGGTCAGGCACCGGGTGGCAAGGAGCAACAGCTTGCC
AATCAGCCAGAGGAGGGCGGAACCTCTGCCAGCGCCTCCGGTTTGGGATG
TGCCACCAGCACATCGGTACAGAATGTGGCCTACTCGCCAGACGGACAGC
TGCTGGCCGTGACCACCAGTGGAAAACAGAAAGCTCTCCTGCTCTATCGT
TCACGGCCGGAGAACGCCCGCCTGCTCTCCGCCCGCCCACTGGCCCGGGC
GTCCAGTGCCCTGCGCTTCTGCAGCGACAGCAGCTCCATTCTGGTCACAG
ACAAGACTGGCGATTGCTATCAGTACGACTGCGTTGAGGTGGAGGCTCCG
CCGCGCCTGCTGTTGGGCCATTTAAGTGTGGTATACGACATCCTGTGGTC
GGAGGACCAGCAGCATATCATCACCTGCGATCGGGATGATAAGATACGCG
TGACCAACTATCCCGCCACCTTTGACATCCACAGCTATTGCCTGGGCCAC
AGGGAGTTTGTCTCAGGCCTGGCACTGCTCACGGAGCAGCATATCGCCTC
CGCTTCGGGGGACAAGACCTTGCGCGTATGGAACTACATTCAGGGCAAAG
AGCTGCTGCAGCACGAGCTACCAGCACCGGCGGTTCGTTTATTGGTACGC
CAGCTGGAGCCGGAGAAGGTCTTCCAGGCGGCGGTGCTCTTCTACGAGCA
CGTGGACGCCCTGGGATTGTATCGCCTGGAGCGCAGCTCCGATGACACCT
GGAGCGTGACGGCCACACAACTGGTTTGCGCCGAAGCGGGCTCATGGAGC
ATTAGCAACTTTACTTTAACCAGCGACCGGATCTACATCACCGGCGCAGA
GAACGAACGCTTAAGCTTGCGCGTCTACGACATCGCAACTGGCCAGCCGG
CGAGCAGCGGCGTGCCCGAGGGCTGGCTGAAGATGGTGCTAGACGGATTG
GGTGCCAACGAGGAGGGCGCACCGCCATTCATTCCCGAGGACTTGTCCGT
TTGGTTTAAGAAGCGCTTCGACAACGTTAGCGACTATTTGGAGCGCAAGA
AGCGGCGCATCGAGGAGCAGCAGCAGCAGAAGTGCGGCTAAAAGCTTTCT
AGACCAT

BS28551.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:22:34
Subject Length Description Subject Range Query Range Score Percent Strand
wuho-RA 1275 CG15897-PA 1..1275 17..1291 6375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
wuho-RA 1463 CG15897-RA 55..1329 17..1291 6375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6288154..6289428 17..1291 6375 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:22:34 has no hits.

BS28551.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:46:48 Download gff for BS28551.complete
Subject Subject Range Query Range Percent Splice Strand
wuho-RA 32..1304 17..1289 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:30 Download gff for BS28551.complete
Subject Subject Range Query Range Percent Splice Strand
wuho-RA 55..1327 17..1289 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:01 Download gff for BS28551.complete
Subject Subject Range Query Range Percent Splice Strand
wuho-RA 55..1327 17..1289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:01 Download gff for BS28551.complete
Subject Subject Range Query Range Percent Splice Strand
X 6288154..6289426 17..1289 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:30 Download gff for BS28551.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6182187..6183459 17..1289 100   Plus

BS28551.pep Sequence

Translation from 16 to 1290

> BS28551.pep
MCTTISFAEPEIVLGHGRRVLFVNPDDLQIFKEIELPPDLGLKGHTSQSQ
ESCTAAAAASTATAASGQAPGGKEQQLANQPEEGGTSASASGLGCATSTS
VQNVAYSPDGQLLAVTTSGKQKALLLYRSRPENARLLSARPLARASSALR
FCSDSSSILVTDKTGDCYQYDCVEVEAPPRLLLGHLSVVYDILWSEDQQH
IITCDRDDKIRVTNYPATFDIHSYCLGHREFVSGLALLTEQHIASASGDK
TLRVWNYIQGKELLQHELPAPAVRLLVRQLEPEKVFQAAVLFYEHVDALG
LYRLERSSDDTWSVTATQLVCAEAGSWSISNFTLTSDRIYITGAENERLS
LRVYDIATGQPASSGVPEGWLKMVLDGLGANEEGAPPFIPEDLSVWFKKR
FDNVSDYLERKKRRIEEQQQQKCG*

BS28551.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
wuho-PA 424 CG15897-PA 1..424 1..424 2194 100 Plus