BS28572.complete Sequence
581 bp assembled on 2012-03-26
GenBank Submission: KX804270
> BS28572.complete
GAAGTTATCAGTCGACATGCTTCGATTCAATTTAATCGTGGCAGTTTGCG
AGAATTTCGGAATCGGCATCAGAGGCGATCTACCATGGCGCATTAAATCT
GAGCTGAAGTACTTCAGCCGCACCACCAAGCGAACAAGTGATCCCACCAA
GCAAAATGCCGTGGTAATGGGCAGGAAAACCTACTTCGGAGTGCCGGAAA
GCAAGAGGCCTCTTCCCGATCGGCTGAACATAGTGCTGAGCACCACACTT
CAGGAAAGTGATCTGCCCAAGGGAGTACTATTGTGCCCCAATCTCGAGAC
GGCCATGAAGATCCTTGAGGAGCAGAACGAAGTGGAGAACATTTGGATTG
TGGGCGGTAGTGGAGTCTACGAGGAGGCCATGGCCTCGCCAAGGTGTCAC
CGGCTGTACATTACCAAAATAATGCAGAAGTTCGATTGCGACACCTTTTT
CCCCGCGATCCCTGACAGCTTTCGAGAGGTCGCGCCCGATTCCGACATGC
CACTGGGTGTGCAGGAGGAGAATGGCATTAAATTCGAGTACAAGATTTTG
GAGAAACACTCATAAAAGCTTTCTAGACCAT
BS28572.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:09:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhfr-RB | 549 | CG14887-PB | 1..549 | 17..565 | 2745 | 100 | Plus |
| Dhfr-RA | 549 | CG14887-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:09:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhfr-RB | 662 | CG14887-RB | 95..643 | 17..565 | 2745 | 100 | Plus |
| Dhfr-RA | 595 | CG14887-RA | 28..576 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:09:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16481391..16481859 | 97..565 | 2345 | 100 | Plus |
| 3R | 32079331 | 3R | 16481261..16481340 | 17..96 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:09:35 has no hits.
BS28572.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:27 Download gff for
BS28572.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dhfr-RB | 63..609 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:35 Download gff for
BS28572.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dhfr-RA | 28..574 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:08 Download gff for
BS28572.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dhfr-RA | 28..574 | 17..563 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:08 Download gff for
BS28572.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16481261..16481340 | 17..96 | 100 | -> | Plus |
| 3R | 16481391..16481857 | 97..563 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:35 Download gff for
BS28572.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12306983..12307062 | 17..96 | 100 | -> | Plus |
| arm_3R | 12307113..12307579 | 97..563 | 100 | | Plus |
BS28572.pep Sequence
Translation from 16 to 564
> BS28572.pep
MLRFNLIVAVCENFGIGIRGDLPWRIKSELKYFSRTTKRTSDPTKQNAVV
MGRKTYFGVPESKRPLPDRLNIVLSTTLQESDLPKGVLLCPNLETAMKIL
EEQNEVENIWIVGGSGVYEEAMASPRCHRLYITKIMQKFDCDTFFPAIPD
SFREVAPDSDMPLGVQEENGIKFEYKILEKHS*
BS28572.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhfr-PB | 182 | CG14887-PB | 1..182 | 1..182 | 956 | 100 | Plus |
| Dhfr-PA | 182 | CG14887-PA | 1..182 | 1..182 | 956 | 100 | Plus |
