BS28573.complete Sequence
623 bp assembled on 2012-03-26
GenBank Submission: KX803510
> BS28573.complete
GAAGTTATCAGTCGACATGGACGAAATCCTCTTTCCCACGCAGCAAAAAA
GCAACTCCCTAAGCGACGGCGACGATGTCGACCTGAAATTCTTCCAGTCG
GCCTCCGGCGAGCGGAAGGACAGCGACACCTCGGATCCGGGAAACGATGC
GGATCGTGATGGCAAGGATGCGGATGGGGACAACGACAACAAGAACACGG
ACGGAGATGGTGACTCTGGCGAGCCGGCGCACAAAAAGCTCAAGACGAAG
AAGGAACTGGAGGAGGAGGAGCGCGAACGAATGCAGGTTCTCGTTTCCAA
CTTTACGGAAGAACAGCTGGATCGCTACGAAATGTATCGTCGCTCTGCCT
TTCCCAAGGCCGCCGTCAAGCGTCTAATGCAAACTATCACCGGCTGTTCC
GTGTCCCAGAATGTTGTGATAGCCATGTCCGGCATTGCGAAGGTCTTCGT
CGGCGAGGTTGTGGAGGAAGCCCTCGACGTGATGGAGGCCCAAGGTGAAT
CCGGTGCCCTGCAGCCCAAATTCATACGAGAGGCAGTGCGACGACTGAGG
ACCAAGGATCGGATGCCCATAGGCAGATACCAGCAGCCCTATTTCAGACT
GAACTAGAAGCTTTCTAGACCAT
BS28573.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:09:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf11-RA | 591 | CG4079-PA | 1..591 | 17..607 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:09:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf11-RA | 777 | CG4079-RA | 89..679 | 17..607 | 2955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:09:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9762522..9762843 | 607..286 | 1610 | 100 | Minus |
2L | 23513712 | 2L | 9762905..9763174 | 286..17 | 1350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:09:52 has no hits.
BS28573.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:30 Download gff for
BS28573.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf11-RA | 71..661 | 17..607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:46 Download gff for
BS28573.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf11-RA | 89..679 | 17..607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:18 Download gff for
BS28573.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf11-RA | 89..679 | 17..607 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:18 Download gff for
BS28573.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9762522..9762843 | 286..607 | 100 | <- | Minus |
2L | 9762906..9763174 | 17..285 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:46 Download gff for
BS28573.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9762522..9762843 | 286..607 | 100 | <- | Minus |
arm_2L | 9762906..9763174 | 17..285 | 100 | | Minus |
BS28573.pep Sequence
Translation from 16 to 606
> BS28573.pep
MDEILFPTQQKSNSLSDGDDVDLKFFQSASGERKDSDTSDPGNDADRDGK
DADGDNDNKNTDGDGDSGEPAHKKLKTKKELEEEERERMQVLVSNFTEEQ
LDRYEMYRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEVVE
EALDVMEAQGESGALQPKFIREAVRRLRTKDRMPIGRYQQPYFRLN*
BS28573.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf11-PA | 196 | CG4079-PA | 1..196 | 1..196 | 1002 | 100 | Plus |