BS28576.complete Sequence
521 bp assembled on 2012-03-26
GenBank Submission: KX803380
> BS28576.complete
GAAGTTATCAGTCGACATGCCATTTTTAAGAAAGCTGGTCAGACAAGAAT
TTTGCTTTTGCATCTCGCTGACTTCTGGATGCATCATAGTTTCATTCTAC
ACACTGTTTTTCGGATTCCTTAACGCAGGCACTACTGTGGATGAGGTTAT
ATACAAGAACACACTCAAGACTGATGTTTATGCGAAATGGTTCAATGTAT
TTCATATAGCTCTGATGATCGCAGCTGCAGTTATCCTGCTGATATCTGTT
ATGACGAAGTACTTAAGGATCGTTTTCGTGTGGATGGCCATGTTCATCAT
TCATATGATATCGTACTACATCATCTTCAATGCTTTGATAAATGTTCGCA
ATCCGTTCTTTAAAAGTGCTGTCTCTGCGATTATTTATGTTTTCGTGAAT
TTAGTGACGTTGGGAATCGATTTATTTTGTTTGCTCAAAGTCTACACGTA
TTATTATGTAAAAGCGCATCCAGATGAATTCAGACCAGTTTGTGTGGATA
AATGAAAGCTTTCTAGACCAT
BS28576.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42263-RB | 489 | CG42263-PB | 1..489 | 17..505 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42263-RB | 1089 | CG42263-RB | 48..536 | 17..505 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19955246..19955404 | 414..256 | 795 | 100 | Minus |
| 3L | 28110227 | 3L | 19955608..19955752 | 161..17 | 725 | 100 | Minus |
| 3L | 28110227 | 3L | 19955453..19955547 | 256..162 | 475 | 100 | Minus |
| 3L | 28110227 | 3L | 19955100..19955192 | 505..413 | 465 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:10:03 has no hits.
BS28576.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:32 Download gff for
BS28576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..535 | 17..504 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:53 Download gff for
BS28576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..535 | 17..504 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:23 Download gff for
BS28576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..535 | 17..504 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:23 Download gff for
BS28576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19955101..19955191 | 414..504 | 100 | <- | Minus |
| 3L | 19955247..19955403 | 257..413 | 100 | <- | Minus |
| 3L | 19955453..19955547 | 162..256 | 100 | <- | Minus |
| 3L | 19955608..19955752 | 17..161 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:53 Download gff for
BS28576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19948201..19948291 | 414..504 | 100 | <- | Minus |
| arm_3L | 19948347..19948503 | 257..413 | 100 | <- | Minus |
| arm_3L | 19948553..19948647 | 162..256 | 100 | <- | Minus |
| arm_3L | 19948708..19948852 | 17..161 | 100 | | Minus |
BS28576.pep Sequence
Translation from 16 to 504
> BS28576.pep
MPFLRKLVRQEFCFCISLTSGCIIVSFYTLFFGFLNAGTTVDEVIYKNTL
KTDVYAKWFNVFHIALMIAAAVILLISVMTKYLRIVFVWMAMFIIHMISY
YIIFNALINVRNPFFKSAVSAIIYVFVNLVTLGIDLFCLLKVYTYYYVKA
HPDEFRPVCVDK*
BS28576.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42263-PB | 162 | CG42263-PB | 1..162 | 1..162 | 843 | 100 | Plus |
