BS28579.complete Sequence
575 bp assembled on 2012-03-26
GenBank Submission: KX805313
> BS28579.complete
GAAGTTATCAGTCGACATGACGAATCTGCGCAAGGAACTGGAGAAATGCA
AGCACCCCAACAGCCGGAAAACCAAGGCGCTGGGCAAGAAGGCACGTCGC
CAAAACAACAAGCACAAGGTCCGTTTGGGTCATGCCATCAAAAGCAACAT
CACTGGCGAGAAGTTGAGCTGGTTTCTCGGCCAAATCGATGAGGGACGCA
CTGAACCGCTGAGGCCGCAGGAGCTGGAGGATCTGATTGAGCTCTATTTT
ACGCGATTCGACGAGGAGCTGGAGCAGATTAACCTAAAGCAGTCGATTGG
CAAACATCGGGCCAATCAGCATGCCGCCCGCAAGGATGTGATCACCATGA
CGCTGGAGAAGGAGCGCAACGAATTCCGCACTGGCGGTCTGGAGCTGATG
AACCTCTGCGATCCACTCAAGCTGAAAATGCTGCGCGATTGGGACGGCAG
TGCGCTCAGTGTGCAGCACCTGAAACTCGACCTAGTCTCCTATAACATGC
TGCAGCGGCTGAAGGAGCAGTCTAAGAAAAAAGAAACCAGCGAGCAGATG
GAAACATAAAAGCTTTCTAGACCAT
BS28579.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15027-RA | 543 | CG15027-PA | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15027-RA | 602 | CG15027-RA | 38..582 | 17..561 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15085179..15085721 | 561..19 | 2715 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:10:07 has no hits.
BS28579.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:33 Download gff for
BS28579.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15027-RA | 18..552 | 17..551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:54 Download gff for
BS28579.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15027-RA | 38..572 | 17..551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:25 Download gff for
BS28579.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15027-RA | 38..572 | 17..551 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:25 Download gff for
BS28579.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15085189..15085722 | 17..551 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:54 Download gff for
BS28579.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14979222..14979755 | 17..551 | 99 | | Minus |
BS28579.pep Sequence
Translation from 16 to 558
> BS28579.pep
MTNLRKELEKCKHPNSRKTKALGKKARRQNNKHKVRLGHAIKSNITGEKL
SWFLGQIDEGRTEPLRPQELEDLIELYFTRFDEELEQINLKQSIGKHRAN
QHAARKDVITMTLEKERNEFRTGGLELMNLCDPLKLKMLRDWDGSALSVQ
HLKLDLVSYNMLQRLKEQSKKKETSEQMET*
BS28579.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15027-PA | 180 | CG15027-PA | 1..180 | 1..180 | 929 | 100 | Plus |