BS28580.complete Sequence
374 bp assembled on 2012-03-26
GenBank Submission: KX803773
> BS28580.complete
GAAGTTATCAGTCGACATGAAACTACTGATTGTTGTTCTTGCCCTGGTGG
CCGCAGTTTTGGCCAGACCTCAATTTGGACCTGGTGGTCAAGGAGGATTT
GGTGGTCAACAAGGCGGCTTTGGTGGACAGGGAGGATTCGGTGGAGGTCC
TGGATTTGGTGGACAAGGTGGTTTCGGTGGCGGACCCGGAGAATATGGCG
GTCAAGGTGGTTTCGGTGGCGGACCGGGAGGATATGGCGGTCAAGGTGGT
TTCGGTGGCGGACCGGGAGGATTTGGCGGTCAAGGTGGTTTCGGTGGCGG
ACAAGGCGGCTTTGGCGAACACCACAGACACCATGGAGGACATCATGGGC
GCTTCTAAAAGCTTTCTAGACCAT
BS28580.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8157-RB | 342 | CG8157-PB | 1..342 | 17..358 | 1710 | 100 | Plus |
CG8157-RA | 342 | CG8157-PA | 1..342 | 17..358 | 1710 | 100 | Plus |
CG8157-RB | 342 | CG8157-PB | 103..262 | 155..317 | 495 | 88.3 | Plus |
CG8157-RB | 342 | CG8157-PB | 139..301 | 119..278 | 495 | 88.3 | Plus |
CG8157-RA | 342 | CG8157-PA | 103..262 | 155..317 | 495 | 88.3 | Plus |
CG8157-RA | 342 | CG8157-PA | 139..301 | 119..278 | 495 | 88.3 | Plus |
CG8157-RB | 342 | CG8157-PB | 136..208 | 230..302 | 275 | 91.8 | Plus |
CG8157-RB | 342 | CG8157-PB | 214..286 | 152..224 | 275 | 91.8 | Plus |
CG8157-RA | 342 | CG8157-PA | 136..208 | 230..302 | 275 | 91.8 | Plus |
CG8157-RA | 342 | CG8157-PA | 214..286 | 152..224 | 275 | 91.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8157-RB | 824 | CG8157-RB | 25..366 | 17..358 | 1710 | 100 | Plus |
CG8157-RA | 427 | CG8157-RA | 25..366 | 17..358 | 1710 | 100 | Plus |
CG8157-RB | 824 | CG8157-RB | 127..286 | 155..317 | 495 | 88.3 | Plus |
CG8157-RB | 824 | CG8157-RB | 163..325 | 119..278 | 495 | 88.3 | Plus |
CG8157-RA | 427 | CG8157-RA | 127..286 | 155..317 | 495 | 88.3 | Plus |
CG8157-RA | 427 | CG8157-RA | 163..325 | 119..278 | 495 | 88.3 | Plus |
CG8157-RB | 824 | CG8157-RB | 160..232 | 230..302 | 275 | 91.8 | Plus |
CG8157-RB | 824 | CG8157-RB | 238..310 | 152..224 | 275 | 91.8 | Plus |
CG8157-RA | 427 | CG8157-RA | 160..232 | 230..302 | 275 | 91.8 | Plus |
CG8157-RA | 427 | CG8157-RA | 238..310 | 152..224 | 275 | 91.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15325961..15326291 | 358..28 | 1655 | 100 | Minus |
2R | 25286936 | 2R | 15326002..15326164 | 278..119 | 495 | 88.3 | Minus |
2R | 25286936 | 2R | 15326041..15326200 | 317..155 | 495 | 88.3 | Minus |
2R | 25286936 | 2R | 15326017..15326089 | 224..152 | 275 | 91.8 | Minus |
2R | 25286936 | 2R | 15326095..15326167 | 302..230 | 275 | 91.8 | Minus |
Blast to na_te.dros performed 2014-11-28 04:10:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 2429..2451 | 12..34 | 106 | 95.7 | Plus |
BS28580.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:33 Download gff for
BS28580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8157-RA | 22..361 | 17..356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:57 Download gff for
BS28580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8157-RA | 25..364 | 17..356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:28 Download gff for
BS28580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8157-RA | 25..364 | 17..356 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:28 Download gff for
BS28580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15325963..15326293 | 24..356 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:57 Download gff for
BS28580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11213468..11213798 | 24..356 | 99 | | Minus |
BS28580.pep Sequence
Translation from 16 to 357
> BS28580.pep
MKLLIVVLALVAAVLARPQFGPGGQGGFGGQQGGFGGQGGFGGGPGFGGQ
GGFGGGPGEYGGQGGFGGGPGGYGGQGGFGGGPGGFGGQGGFGGGQGGFG
EHHRHHGGHHGRF*
BS28580.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8157-PB | 113 | CG8157-PB | 1..113 | 1..113 | 653 | 100 | Plus |
CG8157-PA | 113 | CG8157-PA | 1..113 | 1..113 | 653 | 100 | Plus |
CG7296-PB | 161 | CG7296-PB | 1..123 | 1..108 | 292 | 53.6 | Plus |
CG7296-PA | 161 | CG7296-PA | 1..123 | 1..108 | 292 | 53.6 | Plus |
CG7299-PC | 177 | CG7299-PC | 1..125 | 1..100 | 277 | 51.9 | Plus |
CG7296-PB | 161 | CG7296-PB | 85..161 | 21..100 | 150 | 43.8 | Plus |
CG7296-PA | 161 | CG7296-PA | 85..161 | 21..100 | 150 | 43.8 | Plus |