BS28581.complete Sequence
575 bp assembled on 2012-03-26
GenBank Submission: KX804410
> BS28581.complete
GAAGTTATCAGTCGACATGGAGTATGTGCACTCTGTTTGGAGCTACCTAG
CCTCGATCTGCAACTGCTGGCAATGCACCGAAGATCCAGGTGCGCAGCCC
AACGAGCCGAACGAGCGGACACACCTTCTCGTGGACCCGGTGAACCATAG
TCCTGCCCTTCGACGGAGCAACTCCGATGGCCTCAGCACCGACTACGCCC
ACTCCCTTCCCAAGAAGGACGATCAGAACGCCCTCTCCAGACTGGTGCAG
AATACTGCGATAAACATGATAAACGTTGGAGCCATGGACTGTCACAGCCT
GGAGCACCAGGAGTACGCCGATAGAATAAGATTGTACTCGCAGCGGTTGC
ATCAACAGTGGAACAACGGCCAGCACGCCAGTATCGCACCAAAAGGTCTC
CTTAAAGATGTACCAAGCCATCAGTTCTATCTGTCTAAGCCAACCTATCC
AGATGACACTGCTCAAATGAAGCTCTTCACCGAGAAGGCACACATCAGTG
TCTCGCACATACAGATCGACCACAAAGAGGCCGTGGTTGTTCCCTTCCGG
ATTCCCTGAAAGCTTTCTAGACCAT
BS28581.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14184-RB | 543 | CG14184-PB | 1..543 | 17..559 | 2715 | 100 | Plus |
CG14184-RA | 543 | CG14184-PA | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14184-RB | 656 | CG14184-RB | 69..611 | 17..559 | 2715 | 100 | Plus |
CG14184-RA | 759 | CG14184-RA | 69..611 | 17..559 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20028646..20028813 | 261..94 | 840 | 100 | Minus |
3L | 28110227 | 3L | 20028243..20028378 | 397..262 | 680 | 100 | Minus |
3L | 28110227 | 3L | 20027967..20028059 | 559..467 | 465 | 100 | Minus |
3L | 28110227 | 3L | 20028872..20028952 | 97..17 | 405 | 100 | Minus |
3L | 28110227 | 3L | 20028111..20028191 | 470..390 | 375 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:10:17 has no hits.
BS28581.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:34 Download gff for
BS28581.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14184-RB | 87..628 | 17..558 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:58 Download gff for
BS28581.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14184-RA | 69..610 | 17..558 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:29 Download gff for
BS28581.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14184-RA | 69..610 | 17..558 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:29 Download gff for
BS28581.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20027968..20028059 | 467..558 | 100 | <- | Minus |
3L | 20028115..20028185 | 396..466 | 100 | <- | Minus |
3L | 20028245..20028378 | 262..395 | 100 | <- | Minus |
3L | 20028646..20028809 | 98..261 | 100 | <- | Minus |
3L | 20028872..20028952 | 17..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:58 Download gff for
BS28581.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20021068..20021159 | 467..558 | 100 | <- | Minus |
arm_3L | 20021215..20021285 | 396..466 | 100 | <- | Minus |
arm_3L | 20021345..20021478 | 262..395 | 100 | <- | Minus |
arm_3L | 20021746..20021909 | 98..261 | 100 | <- | Minus |
arm_3L | 20021972..20022052 | 17..97 | 100 | | Minus |
BS28581.pep Sequence
Translation from 16 to 558
> BS28581.pep
MEYVHSVWSYLASICNCWQCTEDPGAQPNEPNERTHLLVDPVNHSPALRR
SNSDGLSTDYAHSLPKKDDQNALSRLVQNTAINMINVGAMDCHSLEHQEY
ADRIRLYSQRLHQQWNNGQHASIAPKGLLKDVPSHQFYLSKPTYPDDTAQ
MKLFTEKAHISVSHIQIDHKEAVVVPFRIP*
BS28581.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14184-PB | 180 | CG14184-PB | 1..180 | 1..180 | 975 | 100 | Plus |
CG14184-PA | 180 | CG14184-PA | 1..180 | 1..180 | 975 | 100 | Plus |