Clone BS28582 Report

Search the DGRC for BS28582

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:285
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG14323-RA
Protein status:BS28582.pep: full length peptide match
Sequenced Size:665

Clone Sequence Records

BS28582.complete Sequence

665 bp assembled on 2012-03-26

GenBank Submission: KX805250

> BS28582.complete
GAAGTTATCAGTCGACATGGCAGTGCTCCAGATTTTATTTTTGCTGATCC
TGGTCAACAGCAATGGATCTCAGAAAACCGACTTGGATGTGGATGAGGAA
CCAGATCATACAGGACCAGAACCAATCGATGGACGATCGTTTTTCTTTCT
GGGTACTTTGTTTCGTCGTTGGCGTAACCGCTGGATGGCCTCTCACAATC
CGGATCCCATATTCGCCGGCCCCGCCTATCCCATATCTGGTTATTACAAT
TGTCCTGTATATGGCTGCAGCCTGGCGGCTATTGGTCCTCAACCAGGTTA
CTACGCTACACCTGCAGGATTTTACACCATGCCTCTGAATCAGCAGCAGG
CTCAGGGGAACAGCAATGTGTATATCTATCAAAGTGATCAAAATTCCGCG
ACGTCTGGAAGTCCCATGGGCTATGGGTATCTGAGCGGAGCTTCGCCGAT
ACGACCAGCTCCGCCTTTCCCTCCACCACCACCTGGTATGCCACCGCCCA
CATCCGTTGGAACGGTACAGGCCAGCGCAGGTGGGTATTCTGGACCAGGA
GCAGGACCTGGACAACGGCCAGGACCGTTTCCAATACCCTTCCAATACCC
TGGGATGAATGGGAAAACAAGTAGCCGGAGGAAGCGCTCGCCCAAGTAAA
AGCTTTCTAGACCAT

BS28582.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14323-RA 633 CG14323-PA 1..633 17..649 3165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14323-RA 914 CG14323-RA 13..646 17..650 3170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:09:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17621467..17622100 650..17 3170 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:09:46 has no hits.

BS28582.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:29 Download gff for BS28582.complete
Subject Subject Range Query Range Percent Splice Strand
CG14323-RA 1..631 17..647 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:41 Download gff for BS28582.complete
Subject Subject Range Query Range Percent Splice Strand
CG14323-RA 13..643 17..647 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:13 Download gff for BS28582.complete
Subject Subject Range Query Range Percent Splice Strand
CG14323-RA 13..643 17..647 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:13 Download gff for BS28582.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17621470..17622100 17..647 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:41 Download gff for BS28582.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13447192..13447822 17..647 100   Minus

BS28582.pep Sequence

Translation from 16 to 648

> BS28582.pep
MAVLQILFLLILVNSNGSQKTDLDVDEEPDHTGPEPIDGRSFFFLGTLFR
RWRNRWMASHNPDPIFAGPAYPISGYYNCPVYGCSLAAIGPQPGYYATPA
GFYTMPLNQQQAQGNSNVYIYQSDQNSATSGSPMGYGYLSGASPIRPAPP
FPPPPPGMPPPTSVGTVQASAGGYSGPGAGPGQRPGPFPIPFQYPGMNGK
TSSRRKRSPK*

BS28582.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14323-PA 210 CG14323-PA 1..210 1..210 1160 100 Plus