BS28584.complete Sequence
791 bp assembled on 2012-03-26
GenBank Submission: KX806056
> BS28584.complete
GAAGTTATCAGTCGACATGGGCGGTCAGGGCAAGGCGATCAATAGGAAGC
GTAAGTTTGTCGGTCGCAAGGCGGACGATCCGGAGTTCGATCTGGACAAG
AAGCAATTCAAGGTGCTCCATCTGAATGCCACCGAAAAGCGGCTGATCAT
CGTTTTGGAAGGAGCCCAACTGGAGACGGTGAAGGTGCACAACACTTTCG
AGCTGCTGAACTGCGACGATCACGCGGGAATTATGCGCAAAAACCAAAGA
GATCCCGGCTCCTGTCGTCCGGACATCACCCACCAGTGCCTGTTGATGCT
CTTCGATTCGCCACTGAACCGGGCCGGTCTGCTTCAGGTCTTTGTGCGCA
CCGAGCATAATGTGCTTATCGAAATCAATCCCCAGACGCGCATCCCGAGG
ACATTTAAACGCTTTGCTGGCCTAATGGTGCAATTGCTGCACAAGTTCCA
AATTCGCGCCAATGACTCCTCACGTCGTCTGATGAGTGTCATTAAGAATC
CGATTACGGATCATGTGCCGGTCGGTTGCAAGAAGTACGCCATGAGCTTC
TCTGGCAAACTATTGCCCAATTGCCGGGATCTGGTGCCACATGGTGACGA
GACGTCGGCCAGCTATGATGAGCCGGTGGTCATCGTTATTGGAGCCTTCG
CACATGGCGTTCTCAAAACGGACTACACGGAGGAGCTGTTCTCCATTAGC
AACTATCCACTTTCGGCGGCCATCGCGTGCTCCAAAATCTGTTCCGCCTT
CGAGGAGGTTTGGGGCGTGGTATAAAAGCTTTCTAGACCAT
BS28584.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:09:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3527-RA | 759 | CG3527-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3527-RA | 970 | CG3527-RA | 100..862 | 13..775 | 3800 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:09:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4552306..4552898 | 183..775 | 2965 | 100 | Plus |
| X | 23542271 | X | 4552072..4552246 | 13..187 | 860 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:09:49 has no hits.
BS28584.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:29 Download gff for
BS28584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3527-RA | 110..866 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:43 Download gff for
BS28584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3527-RA | 110..866 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:15 Download gff for
BS28584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3527-RA | 104..860 | 17..773 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:15 Download gff for
BS28584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4552076..4552243 | 17..184 | 100 | -> | Plus |
| X | 4552308..4552896 | 185..773 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:43 Download gff for
BS28584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4446109..4446276 | 17..184 | 100 | -> | Plus |
| arm_X | 4446341..4446929 | 185..773 | 100 | | Plus |
BS28584.pep Sequence
Translation from 16 to 774
> BS28584.pep
MGGQGKAINRKRKFVGRKADDPEFDLDKKQFKVLHLNATEKRLIIVLEGA
QLETVKVHNTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPL
NRAGLLQVFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRAND
SSRRLMSVIKNPITDHVPVGCKKYAMSFSGKLLPNCRDLVPHGDETSASY
DEPVVIVIGAFAHGVLKTDYTEELFSISNYPLSAAIACSKICSAFEEVWG
VV*
BS28584.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3527-PA | 252 | CG3527-PA | 1..252 | 1..252 | 1317 | 100 | Plus |
