BS28585.complete Sequence
416 bp assembled on 2012-03-26
GenBank Submission: KX801421
> BS28585.complete
GAAGTTATCAGTCGACATGGCCAGAAAAATCATGTCAGTGAAACAGTCGA
GCCGCTCTCCATGTTGTTGGTTCGGTTTGCTCCTGGTCGCCATTTTCCTG
CAGCCATCCGCGAGCCAATACTACGGTTATCCCTATTACGGCGGCGCTAA
TGCGGGAGCGGGATCGGGATACGGGAACATATACGGCAGCGGCATGTACG
GATACCCCTACAGCTACGGCGGATATCCGTACTACTCGTATCCCGGCTAC
AACCCGTACTCGATGTACGGTGGATACGGGCAGTACGGATACCCCTATGG
AGGATATCCCTACGGCGGCAATGGCATGAACGTGGCCTACGCCAGCAGCA
GTGGAGGATTCGCAACAGCCAGTGCGGGTGGAAGCGGATACTACGGCTAG
AAGCTTTCTAGACCAT
BS28585.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14563-RA | 369 | CG14563-PA | 1..369 | 32..400 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14563-RA | 499 | CG14563-RA | 15..400 | 15..400 | 1930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21842058..21842372 | 329..15 | 1575 | 100 | Minus |
| 3L | 28110227 | 3L | 21841907..21841977 | 400..330 | 355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:10:25 has no hits.
BS28585.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:36 Download gff for
BS28585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14563-RA | 17..400 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:02 Download gff for
BS28585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14563-RA | 17..400 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:33 Download gff for
BS28585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14563-RA | 17..400 | 17..400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:33 Download gff for
BS28585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21841907..21841977 | 330..400 | 100 | <- | Minus |
| 3L | 21842058..21842370 | 17..329 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:02 Download gff for
BS28585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21835007..21835077 | 330..400 | 100 | <- | Minus |
| arm_3L | 21835158..21835470 | 17..329 | 100 | | Minus |
BS28585.pep Sequence
Translation from 16 to 399
> BS28585.pep
MARKIMSVKQSSRSPCCWFGLLLVAIFLQPSASQYYGYPYYGGANAGAGS
GYGNIYGSGMYGYPYSYGGYPYYSYPGYNPYSMYGGYGQYGYPYGGYPYG
GNGMNVAYASSSGGFATASAGGSGYYG*
BS28585.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14563-PA | 122 | CG14563-PA | 1..122 | 6..127 | 698 | 100 | Plus |
| CG9269-PA | 146 | CG9269-PA | 48..142 | 37..127 | 138 | 43.7 | Plus |
