BS28586.complete Sequence
590 bp assembled on 2012-03-26
GenBank Submission: KX803204
> BS28586.complete
GAAGTTATCAGTCGACATGAAAACAGCTATCATTCTGCTTATAGCCCTTG
GGGCATGTGCTGCTGAGCCTTCTCCCCGAACTCTAAACTCATTTTGCTCT
TACTTAGACGATGGAAAGGAAACTGTTTCGAGTCTGGGCAACACCAAGAA
GTGTTTTGCTCGTTACCTACCGGAACTGGAAAGTGAAGGGGCTACCTGGT
CGCAAGGATATAATGCCTGTCAGAAGATTACCATTAACGAGCGGCTGTCC
TTGCTAACGGATGCCACTGAGGCTCAGGAGGAGATTCGAGAGGCTGCCCT
GGGCATATCATCATTTATTGATCAGTGTTTGGTCCTGACGGAGGCCGTGG
ACTTTTTCAACTGCTTTGCCAAAATGGCTAAGTTACAGTTGGCGAATGTC
TACAGTATATCATTTAATGCCACCGAGCAGGCTTTAATCCTAAATAAGAA
ATTAAGTAGAATCGAATTGGAGCACTATCGCTGCACAAATCAAACCGAAC
AAAATTATGTCAAAGGAACCAATACAATCTTTCGATCTTTGGATCAGTGT
CTGCAGCAAAATGATACACACTGAAAGCTTTCTAGACCAT
BS28586.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34005-RC | 558 | CG34005-PC | 1..558 | 17..574 | 2790 | 100 | Plus |
CG34005-RB | 558 | CG34005-PB | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34005-RC | 633 | CG34005-RC | 27..585 | 16..574 | 2795 | 100 | Plus |
CG34005-RB | 694 | CG34005-RB | 27..585 | 16..574 | 2795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18048222..18048547 | 52..377 | 1630 | 100 | Plus |
2R | 25286936 | 2R | 18048602..18048800 | 376..574 | 995 | 100 | Plus |
2R | 25286936 | 2R | 18048134..18048171 | 16..53 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:10:28 has no hits.
BS28586.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:36 Download gff for
BS28586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34005-RB | 24..580 | 17..573 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:04 Download gff for
BS28586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34005-RB | 28..584 | 17..573 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:34 Download gff for
BS28586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34005-RB | 28..584 | 17..573 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:34 Download gff for
BS28586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18048223..18048546 | 53..376 | 100 | -> | Plus |
2R | 18048603..18048799 | 377..573 | 100 | | Plus |
2R | 18048135..18048170 | 17..52 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:04 Download gff for
BS28586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13935640..13935675 | 17..52 | 100 | -> | Plus |
arm_2R | 13935728..13936051 | 53..376 | 100 | -> | Plus |
arm_2R | 13936108..13936304 | 377..573 | 100 | | Plus |
BS28586.pep Sequence
Translation from 16 to 573
> BS28586.pep
MKTAIILLIALGACAAEPSPRTLNSFCSYLDDGKETVSSLGNTKKCFARY
LPELESEGATWSQGYNACQKITINERLSLLTDATEAQEEIREAALGISSF
IDQCLVLTEAVDFFNCFAKMAKLQLANVYSISFNATEQALILNKKLSRIE
LEHYRCTNQTEQNYVKGTNTIFRSLDQCLQQNDTH*
BS28586.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34005-PC | 185 | CG34005-PC | 1..185 | 1..185 | 950 | 100 | Plus |
CG34005-PB | 185 | CG34005-PB | 1..185 | 1..185 | 950 | 100 | Plus |
CG5767-PA | 253 | CG5767-PA | 1..186 | 1..180 | 223 | 30.6 | Plus |
CG5770-PA | 213 | CG5770-PA | 7..184 | 5..180 | 208 | 27.9 | Plus |
CG10911-PA | 359 | CG10911-PA | 7..185 | 4..179 | 171 | 24.4 | Plus |