BS28588.complete Sequence
401 bp assembled on 2012-03-26
GenBank Submission: KX801278
> BS28588.complete
GAAGTTATCAGTCGACATGTATGACCAGGTGATATTCACAGCTGAACTCT
TGCACCACAGAACTGTGGGCAGCCAAATCGAGGAGACACGGCGCCATTGG
GAGGAGCGGTGCTCTTGGTTTCCGGCTGCCCAAAGGAATATGGCATCAAG
GTGTTCAGAAATTTACAAGGAGAGTCTTGAAAAATACGGCAACGATTACT
ACGAGTTCTATGCCAATAGGAATCGTCTGAAGGAAGAACACAGAGTTAAT
ACCAAGTCTTATAAACGTCGGGAAAGAAGAAGGTCCCACAGGCCAATGGA
CCACTTAAAAGACTATAGGGTGTCACCAACTTCAAACGGGGAGTACGGAA
GTGTTCGGCCAATGCTTCTCCTTCAATGGCTTTAGAAGCTTTCTAGACCA
T
BS28588.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34106-RB | 369 | CG34106-PB | 1..369 | 17..385 | 1845 | 100 | Plus |
CG34106-RA | 369 | CG34106-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
beat-IIIa-RE | 4457 | CG12621-RE | 2819..3189 | 17..387 | 1855 | 100 | Plus |
CG34106-RB | 4457 | CG34106-RB | 2819..3189 | 17..387 | 1855 | 100 | Plus |
CG34106-RA | 556 | CG34106-RA | 69..439 | 17..387 | 1855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17171480..17171850 | 17..387 | 1855 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:10:36 has no hits.
BS28588.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:38 Download gff for
BS28588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34106-RA | 74..442 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:09 Download gff for
BS28588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34106-RA | 69..437 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:38 Download gff for
BS28588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34106-RA | 69..437 | 17..385 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:38 Download gff for
BS28588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17171480..17171848 | 17..385 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:09 Download gff for
BS28588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17171480..17171848 | 17..385 | 100 | | Plus |
BS28588.pep Sequence
Translation from 16 to 384
> BS28588.pep
MYDQVIFTAELLHHRTVGSQIEETRRHWEERCSWFPAAQRNMASRCSEIY
KESLEKYGNDYYEFYANRNRLKEEHRVNTKSYKRRERRRSHRPMDHLKDY
RVSPTSNGEYGSVRPMLLLQWL*
BS28588.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34106-PB | 122 | CG34106-PB | 1..122 | 1..122 | 665 | 100 | Plus |
CG34106-PA | 122 | CG34106-PA | 1..122 | 1..122 | 665 | 100 | Plus |
CG34169-PA | 124 | CG34169-PA | 4..120 | 2..118 | 296 | 49.6 | Plus |
CG3611-PB | 121 | CG3611-PB | 5..118 | 5..118 | 164 | 29.8 | Plus |
CG3611-PC | 121 | CG3611-PC | 5..118 | 5..118 | 164 | 29.8 | Plus |