BS28593.complete Sequence
335 bp assembled on 2012-03-26
GenBank Submission: KX803163
> BS28593.complete
GAAGTTATCAGTCGACATGCGCACGAAACACCTGATCCTGATACTGATCG
GAGTGATAATCGCCACGATCGTCTTCATCGCATTTGGTCCAGCCGGAGAG
CCGAACGATTCATTCAAGAACATCGTTGTCCAGACGCACCAGCAGTTTAA
AGAGTTCCAGCGAGGAGCGCGGGCTTTATCAATGCGCTTGCACAGCGATT
ACTCGTATTCCATATTTACCTGTGTGAGGAGTAAACAGGCGCTATTGATT
GCCTATAGCCATCGGTTCAATGTCGCACCGCCACTCACATGCAGAGCAAT
GCAATTAAACTGTAGCTGAAAGCTTTCTAGACCAT
BS28593.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14764-RB | 303 | CG14764-PB | 1..303 | 17..319 | 1515 | 100 | Plus |
| CG14764-RC | 1314 | CG14764-PC | 1..144 | 17..160 | 720 | 100 | Plus |
| CG14764-RA | 1314 | CG14764-PA | 1..144 | 17..160 | 720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14764-RB | 1293 | CG14764-RB | 836..1140 | 16..320 | 1525 | 100 | Plus |
| CG14764-RC | 2272 | CG14764-RC | 366..510 | 16..160 | 725 | 100 | Plus |
| CG14764-RA | 2742 | CG14764-RA | 836..980 | 16..160 | 725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7951882..7952044 | 320..158 | 815 | 100 | Minus |
| 2R | 25286936 | 2R | 7953902..7954046 | 160..16 | 725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:10:46 has no hits.
BS28593.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:39 Download gff for
BS28593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14764-RB | 827..1128 | 17..318 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:14 Download gff for
BS28593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14764-RB | 837..1138 | 17..318 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:42 Download gff for
BS28593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14764-RB | 837..1138 | 17..318 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:42 Download gff for
BS28593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7951884..7952041 | 161..318 | 100 | <- | Minus |
| 2R | 7953902..7954045 | 17..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:14 Download gff for
BS28593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3839389..3839546 | 161..318 | 100 | <- | Minus |
| arm_2R | 3841407..3841550 | 17..160 | 100 | | Minus |
BS28593.pep Sequence
Translation from 16 to 318
> BS28593.pep
MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQRG
ARALSMRLHSDYSYSIFTCVRSKQALLIAYSHRFNVAPPLTCRAMQLNCS
*
BS28593.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14764-PB | 100 | CG14764-PB | 1..100 | 1..100 | 513 | 100 | Plus |
| CG14764-PC | 437 | CG14764-PC | 1..52 | 1..52 | 246 | 94.2 | Plus |
| CG14764-PA | 437 | CG14764-PA | 1..52 | 1..52 | 246 | 94.2 | Plus |
