BS28609.complete Sequence
746 bp assembled on 2012-03-26
GenBank Submission: KX801053
> BS28609.complete
GAAGTTATCAGTCGACATGTTAAGACTACTGGGCAGTTTGGGTCGCTCCT
GCTGCTCGTCAGCCAAATCGGGCTTCAAGATCCAGCCAAGTTGTATTTCA
AAGATTTGGTTTGGTCCGATGCCCAAGGATTCGAATTGGATTAAGCCAGG
TCGACTTCACTACATCGAAAACGATGTGGAGAAACAGGTGGACATTATCA
AAACCATAGATGGTGTGGTCGTGATTCTGTACAACAAAGCGAGGGAAAAA
CTAATCTTCGTGCGTCAATTTAGGGGAGCAGTTTACCAGGGAATACATTC
GGCTGGATCACCAGACATGTCCAAGGGAGAAGCTGATCTGGAGCAGTTTC
CTCCCGAAGTAGGAGTCACTTTGGAACTTTGCGGTGGCGCCGTGGACAAG
GACAAAAGCCTGGCGGAGATCGCCAAGGAGGAAGTCCTCGAAGAGTGCGG
TTACGAGGTGCCCACCGAATCCCTGCAGCATGTCTACGACTATAGGTCGG
GTATTGGTACCTCAAGTAGTGCCATGTCTCTGTTCTACTGCGAGGTGTGT
GATGCTCAGAAGGTCTCGGCGGGCGGTGGCATTGGAGAAGAGCGAATCCA
GGTGCTAGAAATGTCCTTGGAGGAGTCGAGGCAGCTGGTCCAAACTGGGG
CGACCACCAATGGTGGACCATCCTGTTTGCTGGGTCTGCTTTGGTTCTTT
CAGCACAAGGCACCCAAGGTTTTAGCTTAGAAGCTTTCTAGACCAT
BS28609.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:11:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42814-RA | 714 | CG42814-PA | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:11:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42814-RA | 796 | CG31063-RA | 35..750 | 15..730 | 3580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:11:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27228719..27229434 | 730..15 | 3580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:11:10 has no hits.
BS28609.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:43 Download gff for
BS28609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42814-RA | 6..714 | 22..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:25 Download gff for
BS28609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42814-RA | 42..750 | 22..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:51 Download gff for
BS28609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42814-RA | 42..750 | 22..730 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:51 Download gff for
BS28609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27228719..27229427 | 22..730 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:25 Download gff for
BS28609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23054441..23055149 | 22..730 | 100 | | Minus |
BS28609.pep Sequence
Translation from 16 to 729
> BS28609.pep
MLRLLGSLGRSCCSSAKSGFKIQPSCISKIWFGPMPKDSNWIKPGRLHYI
ENDVEKQVDIIKTIDGVVVILYNKAREKLIFVRQFRGAVYQGIHSAGSPD
MSKGEADLEQFPPEVGVTLELCGGAVDKDKSLAEIAKEEVLEECGYEVPT
ESLQHVYDYRSGIGTSSSAMSLFYCEVCDAQKVSAGGGIGEERIQVLEMS
LEESRQLVQTGATTNGGPSCLLGLLWFFQHKAPKVLA*
BS28609.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42814-PA | 237 | CG31063-PA | 1..237 | 1..237 | 1236 | 100 | Plus |
CG42813-PA | 212 | CG31063-PA | 4..208 | 27..233 | 641 | 54.6 | Plus |
CG42813-PB | 212 | CG42813-PB | 4..208 | 27..233 | 641 | 54.6 | Plus |