BS28621.complete Sequence
1163 bp assembled on 2012-03-26
GenBank Submission: KX804576
> BS28621.complete
GAAGTTATCAGTCGACATGCACGGATACCGAACCTACAACATGGAGAGCC
ACCATGCCCATCACGACGCCAGTCCCGTGGACCAGAAGCCCCTGGTTGTG
GACCTCTTGGCCACCCAGTACGGCAAGCCCCAGACACCGCCTCCCTCGCC
AAATGAATGCCTATCCAGTCCGGATAACTCCTTGAACGGCAGCCGCGGCT
CGGAGATTCCCGCCGACCCGTCGGTACGCCGCTATCGCACCGCCTTCACC
CGTGACCAGCTGGGTCGCTTGGAGAAGGAGTTCTACAAGGAGAACTACGT
GTCCCGTCCCCGTCGCTGCGAACTGGCCGCCCAGCTGAACCTCCCGGAGA
GCACGATCAAGGTGTGGTTCCAGAACCGCCGCATGAAGGACAAGCGTCAG
AGGATCGCCGTCGCCTGGCCCTACGCAGCCGTCTACTCCGATCCCGCCTT
CGCCGCCTCCATCCTCCAGGCCGCCGCCAACAGCGTGGGCATGCCCTATC
CGCCCTACGCCCCCGCTGCTGCCGCCGCTGCTGCCGCCGCCGCTGCCGTG
GCCACCAATCCGATGATGGCCACCGGAATGCCCCCGATGGGCATGCCCCA
GATGCCCACAATGCAGATGCCCGGACACTCGGGACATGCCGGCCATCCAT
CGCCCTACGGACAGTACCGCTACACGCCCTACCACATCCCCGCCCGCCCG
GCGCCGCCACATCCCGCTGGTCCTCATATGCATCATCCGCACATGATGGG
ATCCAGCGCAACGGGATCGTCGTACTCCGCCGGTGCCGCCGGCCTTTTGG
GCGCTCTGCCCTCCGCCACCTGCTATACCGGACTGGGTGTGGGTGTGCCC
AAGACCCAGACGCCGCCGCTGGATCTGCAGTCGTCGTCATCGCCGCACTC
CTCCACGCTGTCGCTCTCGCCAGTGGGATCCGATCACGCCAAGGTGTTCG
ACCGCAGTCCAGTGGCTCAATCCGCTCCATCAGTTCCTGCTCCCGCTCCA
CTGACCACCACCAGCCCGCTGCCCGCTCCAGGCCTCCTGATGCCCAGTGC
CAAGCGGCCTGCCTCCGACATGTCGCCGCCGCCGACGACAACTGTGATTG
CGGAGCCCAAGCCGAAGCTCTTCAAGCCCTACAAGACTGAGGCGTAAAAG
CTTTCTAGACCAT
BS28621.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:19:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eve-RA | 1131 | CG2328-PA | 1..1131 | 17..1147 | 5655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:19:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eve-RA | 1406 | CG2328-RA | 95..1227 | 15..1147 | 5665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9979624..9980616 | 155..1147 | 4965 | 100 | Plus |
| 2R | 25286936 | 2R | 9979413..9979553 | 15..155 | 705 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:19:56 has no hits.
BS28621.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 14:32:01 Download gff for
BS28621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eve-RA | 175..1303 | 17..1145 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:56 Download gff for
BS28621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eve-RA | 97..1225 | 17..1145 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:51 Download gff for
BS28621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eve-RA | 97..1225 | 17..1145 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:51 Download gff for
BS28621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9979415..9979553 | 17..155 | 100 | -> | Plus |
| 2R | 9979625..9980614 | 156..1145 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:56 Download gff for
BS28621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5866920..5867058 | 17..155 | 100 | -> | Plus |
| arm_2R | 5867130..5868119 | 156..1145 | 100 | | Plus |
BS28621.pep Sequence
Translation from 16 to 1146
> BS28621.pep
MHGYRTYNMESHHAHHDASPVDQKPLVVDLLATQYGKPQTPPPSPNECLS
SPDNSLNGSRGSEIPADPSVRRYRTAFTRDQLGRLEKEFYKENYVSRPRR
CELAAQLNLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASIL
QAAANSVGMPYPPYAPAAAAAAAAAAAVATNPMMATGMPPMGMPQMPTMQ
MPGHSGHAGHPSPYGQYRYTPYHIPARPAPPHPAGPHMHHPHMMGSSATG
SSYSAGAAGLLGALPSATCYTGLGVGVPKTQTPPLDLQSSSSPHSSTLSL
SPVGSDHAKVFDRSPVAQSAPSVPAPAPLTTTSPLPAPGLLMPSAKRPAS
DMSPPPTTTVIAEPKPKLFKPYKTEA*
BS28621.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eve-PA | 376 | CG2328-PA | 1..376 | 1..376 | 2012 | 100 | Plus |
| pb-PC | 777 | CG31481-PC | 153..254 | 38..131 | 208 | 46.1 | Plus |
| pb-PB | 777 | CG31481-PB | 153..254 | 38..131 | 202 | 46.1 | Plus |
| ro-PB | 350 | CG6348-PB | 117..305 | 2..172 | 200 | 34.4 | Plus |
| ro-PA | 350 | CG6348-PA | 117..305 | 2..172 | 200 | 34.4 | Plus |
