BS28695.complete Sequence
515 bp assembled on 2012-03-26
GenBank Submission: KX805900
> BS28695.complete
GAAGTTATCAGTCGACATGGACGATAAATTGGAAAAGTACTGGAGACGTC
TATTTTATATGAAGTCAGTTGCAGAACCTACGTCGTTGGATGCTGATACG
ATAGAATATTTCGGAATATTCAGTATTGACGAACCAAATGTCGCTGCCCA
AAAACGGTGGTACATTTATTATGGCCTTAGATTAGAAAGGTTAAAGGTTC
TGGAAAGGATTCGAAAGAAATATGGCAATAGGAATGTCAGAGAAATATTT
CAGATCGCCACATTCAGCGGAGTGGGATTTCATAAAGTCGTCAGAGAATA
TTTCTCCAACTTAAAATGGTTCACAAGCAGAAATCAATTGGAAGCTCCAC
TAAATAGTTATTATAATGATGAAAGACTAGTGAAAACTGTTTCGGACTTG
CATAACAAGGAGCAAAAAAGAATCTTTGACTATATAATGATACAACACGC
CTGGTTTGAGCGGTATAATGATCAAAAACCACCTCCTGCTAAACATTAAA
AGCTTTCTAGACCAT
BS28695.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:11:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33469-RB | 483 | CG33469-PB | 1..483 | 17..499 | 2415 | 100 | Plus |
| CG33469-RA | 483 | CG33469-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:11:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33469-RB | 600 | CG33469-RB | 75..560 | 15..500 | 2430 | 100 | Plus |
| CG33469-RA | 651 | CG33469-RA | 126..611 | 15..500 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14605692..14606177 | 500..15 | 2430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:11:20 has no hits.
BS28695.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:45 Download gff for
BS28695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33469-RA | 95..575 | 17..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:31 Download gff for
BS28695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33469-RA | 128..608 | 17..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:57 Download gff for
BS28695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33469-RA | 128..608 | 17..497 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:57 Download gff for
BS28695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14605695..14606175 | 17..497 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:31 Download gff for
BS28695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10493200..10493680 | 17..497 | 100 | | Minus |
BS28695.pep Sequence
Translation from 16 to 498
> BS28695.pep
MDDKLEKYWRRLFYMKSVAEPTSLDADTIEYFGIFSIDEPNVAAQKRWYI
YYGLRLERLKVLERIRKKYGNRNVREIFQIATFSGVGFHKVVREYFSNLK
WFTSRNQLEAPLNSYYNDERLVKTVSDLHNKEQKRIFDYIMIQHAWFERY
NDQKPPPAKH*
BS28695.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33469-PB | 160 | CG33469-PB | 1..160 | 1..160 | 858 | 100 | Plus |
| CG33469-PA | 160 | CG33469-PA | 1..160 | 1..160 | 858 | 100 | Plus |
| CG12868-PB | 167 | CG12868-PB | 17..166 | 1..150 | 349 | 39.3 | Plus |
| CG33468-PA | 172 | CG33468-PA | 16..156 | 1..141 | 294 | 36.2 | Plus |
