BS28708.complete Sequence
914 bp assembled on 2012-03-26
GenBank Submission: KX801026
> BS28708.complete
GAAGTTATCAGTCGACATGTTGGCCGGCTGCCCCGATGAGCTGCCCAATC
CGCACAAGAACTGCCTGCACGAGATGCTCCAGGCGTTGATCTGCAACGAC
AACGATGTGAAGCGCTTGAACACGGAGCTAAGGAATCTGAATCTAGAGCT
AAAGGCGGAGCTGGCCAAGATTAACAAGGCGAACCAGAAGTGCGGGCACG
AGAAGAAGGGCAAGGTAGTTTGCGAGAGCACCGAGGATGTGACGAAATTC
GCCCAGCGGATCAATAGCCTGGAAGAGGTGACAGCGCACTTCACCCAGCG
TAGTGAGGAGATTCGAAAGAGGCGGGACAACATCATCATCTATGCCCGCC
AGTGCCTGTATGCCTACAACGAGGAGAAGTGCAAGTTCAAGTCGTTCCAC
GAGAACACGGTGGACTACATAAAGCGGACGGCGACACTCTCCCAGGATGC
GGAGGTTATCCGGGCATGCGGAAAGGAGGTGTGCGAGCTGCATAAGCGCT
TCGTGCGTGAGGTGGCCAAGCTGAAGAGCTGCGAGGCGGAGCTGCTGCCC
TTTTTCAAACTGCTCAAGGATTCCGATCCGAAGACCTACTGCGAGTGCTG
CTGTTTCAAGGGATACGACTGGATGCCCAAGAGCAAGAATCTGGAGGCCG
TGGATGCAATGGCTGGCGAGATCAAGGAACAGATGGGCGACGTACTGGTC
AGGGCCTTCGCTCAACTGCACATTCATTCGCCGCAGGATCCACGCGCCTT
TATTGCCGCCTATCTGATGAATCTTGATCGTAACGAGCAGGAAATGAAGG
AGAAGCTCGTGATTTTCCAAGCAGATCCAGCAGTGCAACCCCAGGAGCTT
TCGGATCCCACATTCAATTGCGAGGATATTTGTCCGAAGCCTGAATGAAA
GCTTTCTAGACCAT
BS28708.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:19:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14282-RA | 882 | CG14282-PA | 1..882 | 17..898 | 4410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:19:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14282-RA | 987 | CG14282-RA | 53..934 | 17..898 | 4410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:19:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19177052..19177933 | 17..898 | 4410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:19:47 has no hits.
BS28708.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 12:48:17 Download gff for
BS28708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14282-RA | 58..933 | 22..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:49 Download gff for
BS28708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14282-RA | 58..933 | 22..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:46 Download gff for
BS28708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14282-RA | 58..933 | 22..897 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:46 Download gff for
BS28708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19177057..19177932 | 22..897 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:49 Download gff for
BS28708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15002779..15003654 | 22..897 | 100 | | Plus |
BS28708.pep Sequence
Translation from 16 to 897
> BS28708.pep
MLAGCPDELPNPHKNCLHEMLQALICNDNDVKRLNTELRNLNLELKAELA
KINKANQKCGHEKKGKVVCESTEDVTKFAQRINSLEEVTAHFTQRSEEIR
KRRDNIIIYARQCLYAYNEEKCKFKSFHENTVDYIKRTATLSQDAEVIRA
CGKEVCELHKRFVREVAKLKSCEAELLPFFKLLKDSDPKTYCECCCFKGY
DWMPKSKNLEAVDAMAGEIKEQMGDVLVRAFAQLHIHSPQDPRAFIAAYL
MNLDRNEQEMKEKLVIFQADPAVQPQELSDPTFNCEDICPKPE*
BS28708.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14282-PA | 293 | CG14282-PA | 1..293 | 1..293 | 1562 | 100 | Plus |
