BS28719.complete Sequence
617 bp assembled on 2012-03-26
GenBank Submission: KX801537
> BS28719.complete
GAAGTTATCAGTCGACATGGCCAAAATCGTACTCTTCTGCCTGCTGAGCC
TCTTGGCATGCGCTGCAGGTCAACGCATTACGACAATCCACCTGGATGGA
GTGCAGTACTTCATCAGCCGAATGAATCCCTACTCCCCGGAGCTCAACTA
CTTCCTGGCCTACCAGTACTGTCGCTCCCTGGGCCTGCAACTGGCCTCCT
TTGAGACGAAGGAGAAGGCCGAGTCGATGACCACGTATCTGAAGAATGCC
GGTTACGGCAACTACGATTTCTGGACCTCCGGCAATCGCCTGGGCACGGG
CATGTTCCTATGGATGAGCACTGGTCTGCCGTTTAACGCCACTTTTGATT
TCTTCGAAAACTCGGCGGACGCCATCCAGGCCGGTCTGCTCGATCCCGTC
GATCATAATAGCAACACCTCACCCCAGCGCACCGCTCGCGACAGCAGCAG
TGGCGCCGAGAAGGGATGCGTGATCCTGAAGCAGCCCACGCTCAAGTGGA
TGCCCGAGGACTGCTCGGCCGTGAAGGACTTCATTTGTGAGCAGACCCGC
TGCTACTACTACAACTACGGCAGCATCCCCGTCTCGTCGGCGCAGGGGTA
AAAGCTTTCTAGACCAT
BS28719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:16:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43164-RD | 585 | CG43164-PD | 1..585 | 17..601 | 2925 | 100 | Plus |
CG43164-RA | 585 | CG43164-PA | 1..585 | 17..601 | 2925 | 100 | Plus |
CG43164-RC | 1476 | CG43164-PC | 1..581 | 17..597 | 2905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:16:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43164-RD | 1962 | CG43164-RD | 233..817 | 17..601 | 2925 | 100 | Plus |
CG43164-RA | 2450 | CG43164-RA | 233..817 | 17..601 | 2925 | 100 | Plus |
CG43164-RC | 2338 | CG43164-RC | 556..1136 | 17..597 | 2905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:16:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17505634..17506011 | 67..444 | 1890 | 100 | Plus |
2R | 25286936 | 2R | 17506154..17506314 | 441..601 | 805 | 100 | Plus |
2R | 25286936 | 2R | 17502909..17502962 | 17..70 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:16:25 has no hits.
BS28719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:38 Download gff for
BS28719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18431-RA | 182..764 | 17..599 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:04 Download gff for
BS28719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43164-RA | 233..815 | 17..599 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:15 Download gff for
BS28719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43164-RA | 233..815 | 17..599 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:15 Download gff for
BS28719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17502909..17502960 | 17..68 | 100 | -> | Plus |
2R | 17505636..17506011 | 69..444 | 100 | -> | Plus |
2R | 17506158..17506312 | 445..599 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:04 Download gff for
BS28719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13390414..13390465 | 17..68 | 100 | -> | Plus |
arm_2R | 13393141..13393516 | 69..444 | 100 | -> | Plus |
arm_2R | 13393663..13393817 | 445..599 | 100 | | Plus |
BS28719.pep Sequence
Translation from 16 to 600
> BS28719.pep
MAKIVLFCLLSLLACAAGQRITTIHLDGVQYFISRMNPYSPELNYFLAYQ
YCRSLGLQLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWM
STGLPFNATFDFFENSADAIQAGLLDPVDHNSNTSPQRTARDSSSGAEKG
CVILKQPTLKWMPEDCSAVKDFICEQTRCYYYNYGSIPVSSAQG*
BS28719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43164-PD | 194 | CG43164-PD | 1..194 | 1..194 | 1039 | 100 | Plus |
CG43164-PA | 194 | CG18431-PA | 1..194 | 1..194 | 1039 | 100 | Plus |
CG43164-PC | 491 | CG43164-PC | 1..194 | 1..194 | 1039 | 100 | Plus |
CG43164-PB | 193 | CG18431-PB | 1..193 | 1..194 | 1023 | 99.5 | Plus |
CG43164-PE | 490 | CG43164-PE | 1..193 | 1..194 | 1023 | 99.5 | Plus |