BS28721.complete Sequence
515 bp assembled on 2012-03-26
GenBank Submission: KX806059
> BS28721.complete
GAAGTTATCAGTCGACATGTGGCTCTGGGACTATATTATGCTAATCAGAC
AGCGACAGGAGACGCGGCGCAATGTCAGAGTTCCCTTGGTTTACCTCGGC
ATAGGTGCTGTTGGTCTGTGCGCCATCTACCTGATCTTTGGCTGGGGCGC
CCAACTACTGTGCAACATCATTGGGGTTCTGTACCCTGCATATATTTCCA
TCCATGCCATCGAGTCCAGCACAAAGCAGGACGACACCAAGTGGCTGATC
TACTGGGTCACGTTTGGAATCTTCACCGTGATTGAATTCTTTTCGAGTCT
GCTAACTTCGGTGATTCCCTTTTACTGGCTGCTGAAGTGTGCTTTCCTCA
TCTGGTGCATGCTGCCCACGGAACAGAATGGTTCTACCATCATCTACAAC
AAGCTGGTGCGACCCTACTTCCTGAAACATCACGAATCCGTTGACAGGAT
CATCGATGATGGCATGAAGAAAGCCGCTGGAGTGCTGAAGCATGACTAGA
AGCTTTCTAGACCAT
BS28721.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:16:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8331-RB | 483 | CG8331-PB | 1..483 | 17..499 | 2415 | 100 | Plus |
| CG8331-RD | 537 | CG8331-PD | 142..537 | 104..499 | 1980 | 100 | Plus |
| CG8331-RC | 462 | CG8331-PC | 67..462 | 104..499 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:16:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8331-RB | 877 | CG8331-RB | 205..690 | 17..502 | 2430 | 100 | Plus |
| CG8331-RD | 846 | CG8331-RD | 261..659 | 104..502 | 1995 | 100 | Plus |
| CG8331-RC | 1023 | CG8331-RC | 438..836 | 104..502 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:16:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14172287..14172522 | 102..337 | 1180 | 100 | Plus |
| 3R | 32079331 | 3R | 25786726..25787057 | 450..119 | 1090 | 88.6 | Minus |
| 2R | 25286936 | 2R | 14172582..14172683 | 336..437 | 510 | 100 | Plus |
| 2R | 25286936 | 2R | 14171364..14171454 | 17..107 | 455 | 100 | Plus |
| 2R | 25286936 | 2R | 14172747..14172811 | 438..502 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:16:29 has no hits.
BS28721.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:38 Download gff for
BS28721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8331-RB | 222..704 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:06 Download gff for
BS28721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8331-RB | 205..687 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:17 Download gff for
BS28721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8331-RB | 205..687 | 17..499 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:17 Download gff for
BS28721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14171364..14171451 | 17..104 | 100 | -> | Plus |
| 2R | 14172290..14172522 | 105..337 | 100 | -> | Plus |
| 2R | 14172584..14172683 | 338..437 | 100 | -> | Plus |
| 2R | 14172747..14172808 | 438..499 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:06 Download gff for
BS28721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10058869..10058956 | 17..104 | 100 | -> | Plus |
| arm_2R | 10059795..10060027 | 105..337 | 100 | -> | Plus |
| arm_2R | 10060089..10060188 | 338..437 | 100 | -> | Plus |
| arm_2R | 10060252..10060313 | 438..499 | 100 | | Plus |
BS28721.pep Sequence
Translation from 16 to 498
> BS28721.pep
MWLWDYIMLIRQRQETRRNVRVPLVYLGIGAVGLCAIYLIFGWGAQLLCN
IIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVI
PFYWLLKCAFLIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVDRIIDDGM
KKAAGVLKHD*
BS28721.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8331-PB | 160 | CG8331-PB | 1..160 | 1..160 | 862 | 100 | Plus |
| CG8331-PD | 178 | CG8331-PD | 40..178 | 22..160 | 711 | 95.7 | Plus |
| CG8331-PA | 178 | CG8331-PA | 40..178 | 22..160 | 711 | 95.7 | Plus |
| CG8331-PC | 153 | CG8331-PC | 20..153 | 27..160 | 707 | 98.5 | Plus |
| CG4960-PB | 174 | CG4960-PB | 43..174 | 22..160 | 538 | 72.7 | Plus |
