BS28722.complete Sequence
557 bp assembled on 2012-04-25
GenBank Submission: KX804755
> BS28722.complete
GAAGTTATCAGTCGACATGAGCGAATCCGGTGGCTATCAGAAAATGCCGC
CCGGCTGGGACTGCAAATACGATCAAGCAACTGGAAATTGCTATTACATA
AACTATCTGACGAAGGCCATGCAGCTGGAGGATCCGCGCGGCCGCAGTTA
CAGGCAGTTGCAGAACGAACGCTGTTCCACGGAGTCGATAGCCTTGCAGC
AGTTGGTCAGTCAGCCGCAGACGTCGCACAACAGCTCGCCGTACCACGTC
CATCCCAGCAACAACTTGACTGCAATTCGGGCCTTCCAGGAGCGCCAGCA
ACCCACGCTGCACAACATCTCTACCAGTCCATTGTTGTCGGCCTCCTCCA
GGGGACACTTGGAAATGTCTTCACCTCTGCCCTTTCAACGAGCTCGCGTG
GGACCGAATCTCTCGCGGCGCTCCACCATTCAGGAGACCTCGTTCACCAC
GCAAGCGGAAACGGATGCCGTGGTGACCAAAATCCAGAACATGTTCCCCA
CCGCTGGCGAGAACCATATACGTCTCCTGCTCAAGCGGTAAAAGCTTTCT
AGACCAT
BS28722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10508-RL | 1338 | CG10508-PL | 1..521 | 17..537 | 2605 | 100 | Plus |
CG10508-RK | 2202 | CG10508-PK | 1..521 | 17..537 | 2605 | 100 | Plus |
CG10508-RJ | 2199 | CG10508-PJ | 1..518 | 17..537 | 2525 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10508-RL | 2122 | CG10508-RL | 517..1037 | 17..537 | 2605 | 100 | Plus |
CG10508-RK | 2986 | CG10508-RK | 517..1037 | 17..537 | 2605 | 100 | Plus |
CG10508-RJ | 2983 | CG10508-RJ | 517..1034 | 17..537 | 2525 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:20:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21212781..21212961 | 361..541 | 905 | 100 | Plus |
3L | 28110227 | 3L | 21212224..21212389 | 197..362 | 830 | 100 | Plus |
3L | 28110227 | 3L | 21212049..21212158 | 90..199 | 550 | 100 | Plus |
3L | 28110227 | 3L | 21210731..21210804 | 17..90 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:20:27 has no hits.
BS28722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:54 Download gff for
BS28722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10508-RH | 503..1025 | 17..539 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:47 Download gff for
BS28722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10508-RL | 517..1039 | 17..539 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:13 Download gff for
BS28722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10508-RK | 517..1039 | 17..539 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:13 Download gff for
BS28722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21210731..21210804 | 17..90 | 100 | -> | Plus |
3L | 21212050..21212158 | 91..199 | 100 | -> | Plus |
3L | 21212227..21212388 | 200..361 | 100 | -> | Plus |
3L | 21212782..21212959 | 362..539 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:47 Download gff for
BS28722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21203831..21203904 | 17..90 | 100 | -> | Plus |
arm_3L | 21205150..21205258 | 91..199 | 100 | -> | Plus |
arm_3L | 21205327..21205488 | 200..361 | 100 | -> | Plus |
arm_3L | 21205882..21206059 | 362..539 | 100 | | Plus |
BS28722.pep Sequence
Translation from 16 to 540
> BS28722.pep
MSESGGYQKMPPGWDCKYDQATGNCYYINYLTKAMQLEDPRGRSYRQLQN
ERCSTESIALQQLVSQPQTSHNSSPYHVHPSNNLTAIRAFQERQQPTLHN
ISTSPLLSASSRGHLEMSSPLPFQRARVGPNLSRRSTIQETSFTTQAETD
AVVTKIQNMFPTAGENHIRLLLKR*
BS28722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10508-PL | 445 | CG10508-PL | 1..174 | 1..174 | 913 | 100 | Plus |
CG10508-PK | 733 | CG10508-PK | 1..174 | 1..174 | 913 | 100 | Plus |
CG10508-PJ | 732 | CG10508-PJ | 1..173 | 1..174 | 896 | 99.4 | Plus |