BS28723.complete Sequence
272 bp assembled on 2012-03-26
GenBank Submission: KX804227
> BS28723.complete
GAAGTTATCAGTCGACATGTTGAAGAGCAGCAATATAAATAGTGTCCTCA
ACGAACTCCCTAATGACCCAGCAAGGGATTCCACCGCCCAATCTTCTCAC
AATGGAAAACCAAAACAAGATGCGGAAACCTGTTGCTCCTCCCAGGACAA
CGAAGTCATGGCCAGTCTAGCCGCTTTACAGTTGTCCGCTGGCGTCCTGC
AAATAGCGGAGCCTCCACTAAACCATGTGCGCACCCAGCTTAGGGAATTG
ATGTAAAAGCTTTCTAGACCAT
BS28723.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:16:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pallidin-RB | 504 | CG14133-PB | 1..236 | 17..252 | 1180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:16:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pallidin-RB | 952 | CG14133-RB | 67..302 | 17..252 | 1180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:16:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11691036..11691252 | 256..40 | 1085 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:16:02 has no hits.
BS28723.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:34 Download gff for
BS28723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pallidin-RD | 72..304 | 22..254 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:52 Download gff for
BS28723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pallidin-RD | 72..304 | 22..254 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:04 Download gff for
BS28723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pallidin-RB | 72..302 | 22..254 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:04 Download gff for
BS28723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11691038..11691249 | 43..254 | 100 | <- | Minus |
3L | 11691308..11691328 | 22..42 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:52 Download gff for
BS28723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11684138..11684349 | 43..254 | 100 | <- | Minus |
arm_3L | 11684408..11684428 | 22..42 | 100 | | Minus |
BS28723.pep Sequence
Translation from 16 to 255
> BS28723.pep
MLKSSNINSVLNELPNDPARDSTAQSSHNGKPKQDAETCCSSQDNEVMAS
LAALQLSAGVLQIAEPPLNHVRTQLRELM*
BS28723.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pallidin-PB | 167 | CG14133-PB | 1..79 | 1..79 | 394 | 98.7 | Plus |