BS28724.complete Sequence
1241 bp assembled on 2012-03-26
GenBank Submission: KX800983
> BS28724.complete
GAAGTTATCAGTCGCCATGTGTCTTAGGGTTTTGTATGAAAAAATGATGT
GCTGTTGTCCCAAGCTGAAAAAGGGAGGTTTGAATGAGGCCTCTTTTTAC
GAATATGCAGATGCTGTGCCAAAATATTTTAACGACCAAATAGGGAAATT
GAGCGAAGGGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAAACTGCG
AGAGGTTTTCCATCAATCTGGTTTATAACAATGACTCTCGAGATGTGGCG
CTCCACATTAATCCACGGTTGCCACAAAACTATATTGTCCGCAACACCAA
AGTACAGGACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGCCGTTTC
TACTAAGTCGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACTGAGGCA
TGCTATATGATATCGGTAAACGGACAACACTTTGCAGCGTACACTCATCG
AATCCCTTATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATGTAAGTA
ACGTGGAAATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGATTACCC
CAGTCAGAGGCTAATAACATTGAGCTTCACATAGATGATGGGATTAATGA
AATTGATGCCAGCGTTGAGGAGACTGTTAAAATACCTCATGAGTGGTGCA
TTATTAGCGCCCCGAACACACAGTCGGACAGTTCGCCTAAGCGTAACAAT
AGTTCGAATGATCTTGGCCTTACTTTGCCTTATTATGGAGCATTGCCACC
AAATTCGTTGGTCGATGGTCGATGCTTGAAGATTGAAGGGAGAGTGCGAT
TACTTCCCCACTCGTTTTATATAAACCTGCAACAGGGGCAGGACATATGG
CCACATCCAGTAATTGCATTCCACTTAAACCCACGTTTTTCGAAAGCAAG
CAGCGGCGCTATTGGAAAGGCGGTGGTGTGTAGGAATGCCTGGCTTAATG
GAGCTTGGGCACAAGAAGAGCGTTCGGAGTTTGACACAAACTTTCGCCCT
GGTCGGTCTTTTTGTTTAGCCATTGTTTGTACCAAAACATCCTTTGAGGT
GTATGTCAATCGGCAGTTTATGACTGATTTTAAATATAAGGTTAGCCCTG
AGGTGGTGGACACTGTCTACATACAAGGAGATGTTAAACTTTGGAATGTA
ACGCTGGAAAAAAATCAGATGATTAAAGGCAAAAATATGCGAGTCTATCA
GAATCCGTGGTTCTTTAGTGAGTAGAAGCTTTCTAGACCAT
BS28724.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:16:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-RB | 1209 | CG11372-PB | 1..1209 | 17..1225 | 6030 | 99.9 | Plus |
| galectin-RD | 1206 | CG11372-PD | 70..1206 | 89..1225 | 5670 | 99.9 | Plus |
| galectin-RE | 1260 | CG11372-PE | 124..1260 | 89..1225 | 5670 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:16:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-RB | 1694 | CG11372-RB | 373..1586 | 17..1230 | 6040 | 99.8 | Plus |
| galectin-RF | 1536 | CG11372-RF | 285..1428 | 87..1230 | 5690 | 99.8 | Plus |
| galectin-RD | 1430 | CG11372-RD | 181..1322 | 89..1230 | 5680 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 75076..76103 | 203..1230 | 5125 | 99.9 | Plus |
| 2L | 23513712 | 2L | 74901..75020 | 87..206 | 585 | 99.2 | Plus |
| 2L | 23513712 | 2L | 74501..74573 | 17..89 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:16:05 has no hits.
BS28724.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:35 Download gff for
BS28724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RB | 17..1225 | 17..1225 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:53 Download gff for
BS28724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RB | 373..1581 | 17..1225 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:05 Download gff for
BS28724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RB | 373..1581 | 17..1225 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:05 Download gff for
BS28724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 74501..74572 | 17..88 | 100 | -> | Plus |
| 2L | 74903..75018 | 89..204 | 99 | -> | Plus |
| 2L | 75078..76098 | 205..1225 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:53 Download gff for
BS28724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 74501..74572 | 17..88 | 100 | -> | Plus |
| arm_2L | 74903..75018 | 89..204 | 99 | -> | Plus |
| arm_2L | 75078..76098 | 205..1225 | 100 | | Plus |
BS28724.pep Sequence
Translation from 16 to 1224
> BS28724.pep
MCLRVLYEKMMCCCPKLKKGGLNEASFYEYADAVPKYFNDQIGKLSEGIS
FTVTGNLSVNCERFSINLVYNNDSRDVALHINPRLPQNYIVRNTKVQDIW
GNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRD
VRILEVKGDVSNVEMKRTLVLKYPERLPQSEANNIELHIDDGINEIDASV
EETVKIPHEWCIISAPNTQSDSSPKRNNSSNDLGLTLPYYGALPPNSLVD
GRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVIAFHLNPRFSKASSGAIG
KAVVCRNAWLNGAWAQEERSEFDTNFRPGRSFCLAIVCTKTSFEVYVNRQ
FMTDFKYKVSPEVVDTVYIQGDVKLWNVTLEKNQMIKGKNMRVYQNPWFF
SE*
BS28724.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-PB | 402 | CG11372-PB | 1..402 | 1..402 | 2143 | 100 | Plus |
| galectin-PD | 401 | CG11372-PD | 1..401 | 10..402 | 2022 | 95.8 | Plus |
| galectin-PE | 419 | CG11372-PE | 41..419 | 24..402 | 2006 | 99.7 | Plus |
| galectin-PA | 503 | CG11372-PA | 125..503 | 24..402 | 2006 | 99.7 | Plus |
| galectin-PF | 272 | CG11372-PF | 1..272 | 131..402 | 1454 | 100 | Plus |
