BS28725.complete Sequence
575 bp assembled on 2012-03-26
GenBank Submission: KX803024
> BS28725.complete
GAAGTTATCAGTCGACATGTCGAATATTTCAAGTGTGGCACCACCTCCTC
CCCCACCACCCATGATAGTCACTCCTAGCACACCTGCTACCACAAAGGAA
CGTCCAGTTGGGGACAATATAACCACCGATGAGTGCACTTGGGCATGTGA
GTATCCTGAGGTGCAGAAAGGATGCTATTTAAGTCGCGTCTGCCAATATA
CACCACCGAAACACTGTCAATACTACTCCGTAAACAGCATAGTGCAGGTG
GGACCTACTTGTGGCTTAGTGGCCCTCAGCATGTTGCTTGGTGGCAGTCC
CACGGCAGATGATCTCCTCAAGGATGCAATCGACCAGGAGTATACCCTTA
ATGGTGAACTATTTAGTGCTCAGTATTTGTTTGAACTGACCCGGAAGCAT
ATGCCAGGACCTGCTGCGTGTCAGTTGCATGTAGGTCCTTTGGACTGCAA
AAAAGTCAAGGAACTTTTAAAGGCCGGAGGCTGCCTACTAGTGCCGTATC
CTTTTTCAAAAATATTGCCATTTAAACCCGGGTTGAGTTTGGTATTCCCC
TGCATTTAAAAGCTTTCTAGACCAT
BS28725.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:16:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33108-RB | 543 | CG33108-PB | 1..543 | 17..559 | 2715 | 100 | Plus |
| CG33108-RA | 804 | CG33108-PA | 1..479 | 17..495 | 2395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:16:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33108-RB | 725 | CG33108-RB | 77..621 | 16..560 | 2725 | 100 | Plus |
| CG33108-RA | 931 | CG33108-RA | 77..556 | 16..495 | 2400 | 100 | Plus |
| LSm3-RA | 643 | CG31184-RA | 1..83 | 478..560 | 415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:16:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23996030..23996344 | 246..560 | 1575 | 100 | Plus |
| 3R | 32079331 | 3R | 23995735..23995969 | 16..250 | 1175 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:16:41 has no hits.
BS28725.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:40 Download gff for
BS28725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33108-RB | 67..607 | 17..557 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:10 Download gff for
BS28725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33108-RB | 78..618 | 17..557 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:22 Download gff for
BS28725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33108-RB | 78..618 | 17..557 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:22 Download gff for
BS28725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23995736..23995966 | 17..247 | 100 | -> | Plus |
| 3R | 23996032..23996341 | 248..557 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:10 Download gff for
BS28725.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19821458..19821688 | 17..247 | 100 | -> | Plus |
| arm_3R | 19821754..19822063 | 248..557 | 100 | | Plus |
BS28725.pep Sequence
Translation from 16 to 558
> BS28725.pep
MSNISSVAPPPPPPPMIVTPSTPATTKERPVGDNITTDECTWACEYPEVQ
KGCYLSRVCQYTPPKHCQYYSVNSIVQVGPTCGLVALSMLLGGSPTADDL
LKDAIDQEYTLNGELFSAQYLFELTRKHMPGPAACQLHVGPLDCKKVKEL
LKAGGCLLVPYPFSKILPFKPGLSLVFPCI*
BS28725.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33108-PB | 180 | CG33108-PB | 1..180 | 1..180 | 983 | 100 | Plus |
| CG33108-PA | 267 | CG33108-PA | 1..161 | 1..161 | 880 | 100 | Plus |
