BS28726.complete Sequence
362 bp assembled on 2012-05-15
GenBank Submission: KX800389
> BS28726.complete
GAAGTTATCAGTCGACATGGAGAACAAAAATGATATAAAAGAAATGGACC
TGGGCCTATCTCGAGCAGATATGTTGGAACAGCTCGAAAAAAGGCGAATA
TTTCTGGGCGATGGCAAGGATATGCCGCTGGATCGTCTGGAGGATATCTA
CCGCAATTACATAGTTCCCAAGCCAAAAAGAGAGCGCAAGCCGCGCAATC
CAAGTCCCGATCCCAATTTCAATCCCATTGAAATAGAGCAGCTAGCGGAG
CGCATCAAGTCGGTTGTCATAGTGGGACAGAAACGAGCGCATGCAGAGAA
TAAGAGCGACGACCAGGCCAAGCAAATCAAGATGGACCTGGACTGAAAGC
TTTCTAGACCAT
BS28726.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:21:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42512-RB | 303 | CG42512-PB | 1..303 | 44..346 | 1515 | 100 | Plus |
| CG42512-RA | 303 | CG42512-PA | 1..303 | 44..346 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:21:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42512-RB | 617 | CG42512-RB | 81..410 | 17..346 | 1650 | 100 | Plus |
| CG42512-RA | 1782 | CG42512-RA | 81..410 | 17..346 | 1650 | 100 | Plus |
| CG32573-RA | 1782 | CG32573-RA | 81..410 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:21:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16651587..16651841 | 92..346 | 1275 | 100 | Plus |
| X | 23542271 | X | 16651456..16651530 | 17..91 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:21:02 has no hits.
BS28726.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 14:08:16 Download gff for
BS28726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 81..409 | 17..345 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:31 Download gff for
BS28726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 81..409 | 17..345 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:04 Download gff for
BS28726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 81..409 | 17..345 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:04 Download gff for
BS28726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16651456..16651530 | 17..91 | 100 | -> | Plus |
| X | 16651587..16651840 | 92..345 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:31 Download gff for
BS28726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16545489..16545563 | 17..91 | 100 | -> | Plus |
| arm_X | 16545620..16545873 | 92..345 | 100 | | Plus |
BS28726.pep Sequence
Translation from 16 to 345
> BS28726.pep
MENKNDIKEMDLGLSRADMLEQLEKRRIFLGDGKDMPLDRLEDIYRNYIV
PKPKRERKPRNPSPDPNFNPIEIEQLAERIKSVVIVGQKRAHAENKSDDQ
AKQIKMDLD*
BS28726.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42512-PB | 100 | CG42512-PB | 1..100 | 10..109 | 515 | 100 | Plus |
| CG42512-PA | 100 | CG42512-PA | 1..100 | 10..109 | 515 | 100 | Plus |
