BS28731.complete Sequence
419 bp assembled on 2012-03-26
GenBank Submission: KX805164
> BS28731.complete
GAAGTTATCAGTCGACATGTCTCGCGATTTTTTCGCGCTGTTGGCAATTT
TCATCTTCACTGCGGTCAACGCGGCACCGCAAATTTCACCAACTATCGTT
CCGCAAATCCGCACAAATGGCTTTCAACTTGAGCCCCTCAATCAAGAATA
CTTTCTCAGAATCGAACATCCGGGTGGCACTATTCGCCAGGAATCCGTGA
GCCAGAATGAAGCCGGACATCTGCAGGTTAAAGGTGTGATTAACCAGCCC
TTCGAGGATCAGGATGCCAATCTTATTGTCACCTATGAGGCTGGTCCGAA
TGGATATGTTGCCAAATACAGCTTCGGCAAGGGTCCTCCAACACCGCCTC
CTGACACACCATTATTCCTCAGTCCCGGTGCTCTGAAAACTGCAGCGGGA
TAGAAGCTTTCTAGACCAT
BS28731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:16:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42561-RA | 387 | CG42561-PA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:16:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42561-RA | 566 | CG42561-RA | 29..416 | 16..403 | 1940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:16:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17685153..17685398 | 158..403 | 1230 | 100 | Plus |
2R | 25286936 | 2R | 17684973..17685095 | 37..159 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:16:51 has no hits.
BS28731.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:41 Download gff for
BS28731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42561-RA | 167..553 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:14 Download gff for
BS28731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42561-RA | 30..416 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:26 Download gff for
BS28731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42561-RA | 30..416 | 17..403 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:26 Download gff for
BS28731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17684884..17684904 | 17..37 | 100 | -> | Plus |
2R | 17684974..17685095 | 38..159 | 100 | -> | Plus |
2R | 17685155..17685398 | 160..403 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:14 Download gff for
BS28731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13572389..13572409 | 17..37 | 100 | -> | Plus |
arm_2R | 13572479..13572600 | 38..159 | 100 | -> | Plus |
arm_2R | 13572660..13572903 | 160..403 | 100 | | Plus |
BS28731.pep Sequence
Translation from 16 to 402
> BS28731.pep
MSRDFFALLAIFIFTAVNAAPQISPTIVPQIRTNGFQLEPLNQEYFLRIE
HPGGTIRQESVSQNEAGHLQVKGVINQPFEDQDANLIVTYEAGPNGYVAK
YSFGKGPPTPPPDTPLFLSPGALKTAAG*
BS28731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42561-PA | 128 | CG42561-PA | 1..128 | 1..128 | 669 | 100 | Plus |
CG42562-PA | 126 | CG42562-PA | 8..126 | 7..128 | 182 | 43.9 | Plus |