BS28736.complete Sequence
335 bp assembled on 2012-03-26
GenBank Submission: KX802363
> BS28736.complete
GAAGTTATCAGTCGACATGCGCCTGAAAACAGTTTTAACCATCTTTTTCG
CCATATCGCTGACTCTGGTTGCTGGTCAAGATCGGGACTGTGATGAATTG
GCAAGGAGATGTGAATCCTGTGTGAGGCGTCTAAATAATACAATCGATCG
CGATTTACCCCTCTTCAATAGAGAGTGCAGACAAAGGACCGAATTATCTT
GGCGCTGGAGGAACGTCGGACGCTGTGAGCTCTCCAAGCTAAATTGCTTG
GGTTGGCAATCACCCATGAACTGTGAAGACATTGCTATGAGGGCTGGTAT
GGAACGCAGGCGTACTTAAAAGCTTTCTAGACCAT
BS28736.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:16:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ea-RA | 303 | CG16931-PA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:16:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ea-RA | 412 | CG16931-RA | 50..352 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:16:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15649315..15649518 | 253..50 | 1020 | 100 | Minus |
3L | 28110227 | 3L | 15649186..15649254 | 319..251 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:16:37 has no hits.
BS28736.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:40 Download gff for
BS28736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ea-RA | 50..350 | 17..317 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:09 Download gff for
BS28736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ea-RA | 50..350 | 17..317 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:21 Download gff for
BS28736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ea-RA | 50..350 | 17..317 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:21 Download gff for
BS28736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15649188..15649253 | 252..317 | 100 | <- | Minus |
3L | 15649317..15649517 | 51..251 | 100 | <- | Minus |
3L | 15649579..15649612 | 17..50 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:09 Download gff for
BS28736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15642288..15642353 | 252..317 | 100 | <- | Minus |
arm_3L | 15642417..15642617 | 51..251 | 100 | <- | Minus |
arm_3L | 15642679..15642712 | 17..50 | 100 | | Minus |
BS28736.pep Sequence
Translation from 16 to 318
> BS28736.pep
MRLKTVLTIFFAISLTLVAGQDRDCDELARRCESCVRRLNNTIDRDLPLF
NRECRQRTELSWRWRNVGRCELSKLNCLGWQSPMNCEDIAMRAGMERRRT
*
BS28736.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ea-PA | 100 | CG16931-PA | 1..100 | 1..100 | 539 | 100 | Plus |
Eig71Ed-PA | 99 | CG7350-PA | 1..97 | 1..97 | 327 | 59.8 | Plus |
Eig71Ef-PA | 98 | CG7599-PA | 1..97 | 1..98 | 170 | 33.7 | Plus |
Eig71Ej-PA | 98 | CG7588-PA | 1..98 | 1..99 | 159 | 31.3 | Plus |