BS28743.complete Sequence
551 bp assembled on 2012-03-26
GenBank Submission: KX800704
> BS28743.complete
GAAGTTATCAGTCGACATGTGGAGATTCCTTCTGATTTGTAGTATTCAGC
TGATTTGCGCATCAGAGCATAGTGGCGAAGGATATGGCGATGGTTACGGA
TACGGCGGAAGCGGAGGCGGCGGCAGTGGATCACTAGGCAGCGGCGGAGG
AGGCGATGGCCACTTTCACCACCACACACCCACCACGTACTCGGAGATCT
CGAAGCATGTGCCGGTGCATGTGATCGAAAAGGTGCCACTGCCCATTCCC
CATCCGGTCGCCGTTCAGGTGCCCAACGTAATTCGGCTTCAAATTCCGGA
ACCCTATGCCGTCCACGTGCCCGTCCAGCAGGAGATCCATGTGCCGGTGT
ATAAAATAGTGCCCGAAATAACCGAAAAGAAGATACCCTACACCGTCGAG
AAGCCATACCCCGTCGAGGTGGAGAAACCTTATCCCGTCGAGGTGATTAA
GCAGATCAAGATCCCGGTGCCTAAGCCCTATCCTGTTCCGTTTACCATCT
ACAAACACGTCCTGCAAAAGGAGCACGGCTGGTGAAAGCTTTCTAGACCA
T
BS28743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33299-RC | 519 | CG33299-PC | 1..519 | 17..535 | 2595 | 100 | Plus |
CG33299-RB | 582 | CG33299-PB | 76..582 | 29..535 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33299-RC | 762 | CG33299-RC | 46..564 | 17..535 | 2595 | 100 | Plus |
CG33299-RB | 825 | CG33299-RB | 121..627 | 29..535 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9656720..9657226 | 29..535 | 2535 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:17:33 has no hits.
BS28743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:48 Download gff for
BS28743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33299-RC | 46..563 | 17..534 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:30 Download gff for
BS28743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33299-RC | 46..563 | 17..534 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:44 Download gff for
BS28743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33299-RC | 46..563 | 17..534 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:44 Download gff for
BS28743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9656720..9657225 | 29..534 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:30 Download gff for
BS28743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9656720..9657225 | 29..534 | 100 | | Plus |
BS28743.pep Sequence
Translation from 16 to 534
> BS28743.pep
MWRFLLICSIQLICASEHSGEGYGDGYGYGGSGGGGSGSLGSGGGGDGHF
HHHTPTTYSEISKHVPVHVIEKVPLPIPHPVAVQVPNVIRLQIPEPYAVH
VPVQQEIHVPVYKIVPEITEKKIPYTVEKPYPVEVEKPYPVEVIKQIKIP
VPKPYPVPFTIYKHVLQKEHGW*
BS28743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33299-PC | 172 | CG33299-PC | 1..172 | 1..172 | 950 | 100 | Plus |
CG33299-PB | 193 | CG33299-PB | 26..193 | 5..172 | 923 | 100 | Plus |
CG7031-PC | 474 | CG7031-PC | 317..473 | 15..172 | 252 | 34.4 | Plus |
CG7031-PB | 475 | CG7031-PB | 318..474 | 15..172 | 252 | 34.4 | Plus |
CG7031-PA | 475 | CG7031-PA | 318..474 | 15..172 | 252 | 34.4 | Plus |