BS28744.complete Sequence
536 bp assembled on 2012-03-26
GenBank Submission: KX800655
> BS28744.complete
GAAGTTATCAGTCGACATGGAGGCGATTTATCAATTGGTCGTAATCTTAG
CTATTATTTTTGGGCATCTGCAGTTCCAGTCCACGGTGTTAGCTGACCCT
GCTTTTCGTCGCCCAAATGCCATCGCGCCCGCCCGCACCTATAGCGGTGT
ATACAACCACTCGACGATTCACAGAGCTGTCGAAAAGTCCAATTTGACTG
CCCCGGCGGTTCACCAACCTGTCCTCCAGGCACCCGGATTTATAATACCA
TATCAGAACCGTTCGTTGGTTCACGCCAATCAGGGATCTCATGGCGTTTT
ACCAGGTAGCGTTCCAGCGCAAGATTCAGGTCCTTCCAGCGTCTGGGTGG
CCAGTAATAATCACCAACCAGGAGTAACTGGCGTTCTTCAACCAAACCCA
TCCCAAGGTAAAATCGTAAATCCACCATTTGTCATTGGCAAAAATAATGG
ATCGTTTTATTCAACCTATAATGCAACAGTCCCTGGCAGGACTTATCCTT
ATGGAAACCTTTCCATTTGAAAGCTTTCTAGACCAT
BS28744.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42846-RA | 504 | CG42846-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42846-RA | 564 | CG42846-RA | 14..519 | 15..520 | 2530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 231016..231487 | 520..49 | 2360 | 100 | Minus |
| 3L | 28110227 | 3L | 231556..231591 | 50..15 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:17:37 has no hits.
BS28744.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:48 Download gff for
BS28744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42846-RA | 1..503 | 17..519 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:32 Download gff for
BS28744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42846-RA | 16..518 | 17..519 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:46 Download gff for
BS28744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42846-RA | 16..518 | 17..519 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:46 Download gff for
BS28744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 231017..231485 | 51..519 | 100 | <- | Minus |
| 3L | 231556..231589 | 17..50 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:32 Download gff for
BS28744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 231017..231485 | 51..519 | 100 | <- | Minus |
| arm_3L | 231556..231589 | 17..50 | 100 | | Minus |
BS28744.pep Sequence
Translation from 16 to 519
> BS28744.pep
MEAIYQLVVILAIIFGHLQFQSTVLADPAFRRPNAIAPARTYSGVYNHST
IHRAVEKSNLTAPAVHQPVLQAPGFIIPYQNRSLVHANQGSHGVLPGSVP
AQDSGPSSVWVASNNHQPGVTGVLQPNPSQGKIVNPPFVIGKNNGSFYST
YNATVPGRTYPYGNLSI*
BS28744.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42846-PA | 167 | CG42846-PA | 1..167 | 1..167 | 879 | 100 | Plus |
