BS28745.complete Sequence
473 bp assembled on 2012-03-26
GenBank Submission: KX805634
> BS28745.complete
GAAGTTATCAGTCGACATGTTCGCTCTCGTATCGCTTTTCATCCTGGGTG
TTGGTGCCGCCGCCGCCATCGAGCTGCCCATCTACCACTCACCCGCGGCC
ATTGTGAAGCCACTGCTGAAGACCGTAGAGGTGGAGGCACCTGCCCACTA
CGATTTCGCCTACTCGGTGCACGACGAGCACACCGGCGACATCAAGAGCC
AGACGGAGTCGCGGAAGGGCGATCAGGTCCAGGGTCAGTACACGCTGGTC
GATGCCGATGGCTATCTGCGCACCGTGGACTACACTTCGGATGCCCACAA
CGGCTTCAATGCGGTGGTGCGTCGCGATCCCCTGGGCCAGAAGGTGATCA
AGGCTGCGCCCATTGCCAAGCTCCTGGCTCCCGCACCACTGCCACTGGCC
TATGCGGCACCCAAGCTCCTCGCGCCCGCTAAACTGCCCCTCGGCCTTTA
CCATTAGAAGCTTTCTAGACCAT
BS28745.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr30F-RA | 441 | CG31876-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Cpr30B-RA | 462 | CG3818-PA | 127..255 | 179..307 | 240 | 79.1 | Plus |
Cpr64Ab-RA | 363 | CG15007-PA | 157..295 | 182..320 | 230 | 77.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr30F-RA | 827 | CG31876-RA | 72..512 | 17..457 | 2205 | 100 | Plus |
Cpr30B-RA | 711 | CG3818-RA | 196..324 | 179..307 | 240 | 79.1 | Plus |
Cpr64Ab-RA | 552 | CG15007-RA | 225..363 | 182..320 | 230 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9932587..9933018 | 457..26 | 2160 | 100 | Minus |
2L | 23513712 | 2L | 9543143..9543271 | 179..307 | 240 | 79.1 | Plus |
3L | 28110227 | 3L | 4211069..4211207 | 320..182 | 230 | 77.7 | Minus |
3R | 32079331 | 3R | 6687190..6687298 | 227..335 | 215 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:17:41 has no hits.
BS28745.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:49 Download gff for
BS28745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr30F-RA | 6..441 | 22..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:35 Download gff for
BS28745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr30F-RA | 65..500 | 22..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:48 Download gff for
BS28745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr30F-RA | 77..512 | 22..457 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:48 Download gff for
BS28745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9932587..9933019 | 22..457 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:35 Download gff for
BS28745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9932587..9933019 | 22..457 | 99 | | Minus |
BS28745.pep Sequence
Translation from 16 to 456
> BS28745.pep
MFALVSLFILGVGAAAAIELPIYHSPAAIVKPLLKTVEVEAPAHYDFAYS
VHDEHTGDIKSQTESRKGDQVQGQYTLVDADGYLRTVDYTSDAHNGFNAV
VRRDPLGQKVIKAAPIAKLLAPAPLPLAYAAPKLLAPAKLPLGLYH*
BS28745.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr30F-PA | 146 | CG31876-PA | 1..146 | 1..146 | 746 | 100 | Plus |
Cpr31A-PA | 340 | CG33302-PA | 103..233 | 12..146 | 289 | 45.2 | Plus |
Cpr64Aa-PA | 192 | CG15006-PA | 11..158 | 3..138 | 264 | 46.7 | Plus |
Ccp84Ad-PA | 199 | CG2341-PA | 3..162 | 2..137 | 258 | 42.6 | Plus |
Cpr30B-PA | 153 | CG3818-PA | 30..141 | 42..145 | 256 | 50 | Plus |