Clone BS28745 Report

Search the DGRC for BS28745

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:287
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCpr30F-RA
Protein status:BS28745.pep: gold
Sequenced Size:473

Clone Sequence Records

BS28745.complete Sequence

473 bp assembled on 2012-03-26

GenBank Submission: KX805634

> BS28745.complete
GAAGTTATCAGTCGACATGTTCGCTCTCGTATCGCTTTTCATCCTGGGTG
TTGGTGCCGCCGCCGCCATCGAGCTGCCCATCTACCACTCACCCGCGGCC
ATTGTGAAGCCACTGCTGAAGACCGTAGAGGTGGAGGCACCTGCCCACTA
CGATTTCGCCTACTCGGTGCACGACGAGCACACCGGCGACATCAAGAGCC
AGACGGAGTCGCGGAAGGGCGATCAGGTCCAGGGTCAGTACACGCTGGTC
GATGCCGATGGCTATCTGCGCACCGTGGACTACACTTCGGATGCCCACAA
CGGCTTCAATGCGGTGGTGCGTCGCGATCCCCTGGGCCAGAAGGTGATCA
AGGCTGCGCCCATTGCCAAGCTCCTGGCTCCCGCACCACTGCCACTGGCC
TATGCGGCACCCAAGCTCCTCGCGCCCGCTAAACTGCCCCTCGGCCTTTA
CCATTAGAAGCTTTCTAGACCAT

BS28745.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:42
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr30F-RA 441 CG31876-PA 1..441 17..457 2205 100 Plus
Cpr30B-RA 462 CG3818-PA 127..255 179..307 240 79.1 Plus
Cpr64Ab-RA 363 CG15007-PA 157..295 182..320 230 77.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:43
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr30F-RA 827 CG31876-RA 72..512 17..457 2205 100 Plus
Cpr30B-RA 711 CG3818-RA 196..324 179..307 240 79.1 Plus
Cpr64Ab-RA 552 CG15007-RA 225..363 182..320 230 77.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9932587..9933018 457..26 2160 100 Minus
2L 23513712 2L 9543143..9543271 179..307 240 79.1 Plus
3L 28110227 3L 4211069..4211207 320..182 230 77.7 Minus
3R 32079331 3R 6687190..6687298 227..335 215 79.8 Plus
Blast to na_te.dros performed on 2014-11-28 04:17:41 has no hits.

BS28745.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:49 Download gff for BS28745.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr30F-RA 6..441 22..457 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:35 Download gff for BS28745.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr30F-RA 65..500 22..457 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:48 Download gff for BS28745.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr30F-RA 77..512 22..457 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:48 Download gff for BS28745.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9932587..9933019 22..457 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:35 Download gff for BS28745.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9932587..9933019 22..457 99   Minus

BS28745.pep Sequence

Translation from 16 to 456

> BS28745.pep
MFALVSLFILGVGAAAAIELPIYHSPAAIVKPLLKTVEVEAPAHYDFAYS
VHDEHTGDIKSQTESRKGDQVQGQYTLVDADGYLRTVDYTSDAHNGFNAV
VRRDPLGQKVIKAAPIAKLLAPAPLPLAYAAPKLLAPAKLPLGLYH*

BS28745.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:38
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr30F-PA 146 CG31876-PA 1..146 1..146 746 100 Plus
Cpr31A-PA 340 CG33302-PA 103..233 12..146 289 45.2 Plus
Cpr64Aa-PA 192 CG15006-PA 11..158 3..138 264 46.7 Plus
Ccp84Ad-PA 199 CG2341-PA 3..162 2..137 258 42.6 Plus
Cpr30B-PA 153 CG3818-PA 30..141 42..145 256 50 Plus