BS28746.complete Sequence
479 bp assembled on 2012-03-26
GenBank Submission: KX804571
> BS28746.complete
GAAGTTATCAGTCGACATGGCTCCTCGAGAGAAAGTTGAATTTGTGCTGG
TGCGCCTGGCCTTTGTTCCTTACATAAATCCTCTGTACCCGCGCATCAGC
TACCAGATCAGAAAGCACGCTCCCACCGGATCGATTATCCAAGTGCGCGA
TTGGTTCGAGCATGTGATGATGAGGGAGCGCTCCAAGCTGCCCCCAGATG
CTAACATACGCTACGCAGAGTGGCGCATCATCACCGGCGACATGGAGCTG
TTTCAGGTGCAGGGCGTCCGCTTCGACAAGATCATGCTGGTGCTGGGCGA
AGAAAACATCTCGTGGGTCTTCTATCAGAACACGCCACTTTTCCGCCGTA
TCGAGGGCAGCGCCTGCTTCCCTGTTAGCTACTGCGGATGCTGCCTGAAC
AACCAGTACCTGGATATTATGGCCAAAATCAAGCAAACTGTGTCGAGGAA
AAAGATACGATGAAAGCTTTCTAGACCAT
BS28746.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34214-RA | 447 | CG34214-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34214-RA | 537 | CG34214-RA | 67..515 | 17..465 | 2245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24665449..24665838 | 465..76 | 1950 | 100 | Minus |
2R | 25286936 | 2R | 24665898..24665956 | 75..17 | 295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:17:05 has no hits.
BS28746.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:43 Download gff for
BS28746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34214-RA | 65..510 | 17..462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:19 Download gff for
BS28746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34214-RA | 67..512 | 17..462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:32 Download gff for
BS28746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34214-RA | 67..512 | 17..462 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:32 Download gff for
BS28746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24665452..24665838 | 76..462 | 100 | <- | Minus |
2R | 24665898..24665956 | 17..75 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:19 Download gff for
BS28746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20552975..20553361 | 76..462 | 100 | <- | Minus |
arm_2R | 20553421..20553479 | 17..75 | 100 | | Minus |
BS28746.pep Sequence
Translation from 16 to 462
> BS28746.pep
MAPREKVEFVLVRLAFVPYINPLYPRISYQIRKHAPTGSIIQVRDWFEHV
MMRERSKLPPDANIRYAEWRIITGDMELFQVQGVRFDKIMLVLGEENISW
VFYQNTPLFRRIEGSACFPVSYCGCCLNNQYLDIMAKIKQTVSRKKIR*
BS28746.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34214-PA | 148 | CG34214-PA | 1..148 | 1..148 | 787 | 100 | Plus |