BS28748.complete Sequence
548 bp assembled on 2012-03-26
GenBank Submission: KX802006
> BS28748.complete
GAAGTTATCAGTCGACATGGTCCGATCAAGTTGGTCGAAAGTGAGAGTAC
TCCCGTTGCTGTGGTTCCTGTTCCACGGGATTCCCCTGCTGGCCATTCGC
TTGCAGCCCTGCGAATTAGCTGGCCAACTCTACATACTGGATGTCCCGAA
ATCGGAATTACCCCTATGGCTTTGTATTGCCGAATTCGAGAGCCGATTCA
ACACGCACGTTGTGGGCCAGGCCAATGCGGATGGATCCCGGGATTACGGA
CTGTTCCAAATCAGCGATCGCTACTGGTGTGCGCCGCCAAATCGAACGGA
ATACTATGCATTCAACGATTGCAATGTGAATTGCACTCACCTTCTGAGCG
ACGACATCACCATGGCCGTCCAGTGCGCCCGGCTCATTCAGAAGCAACAG
GGCTGGACGGCCTGGTCCGTTTATCCGGAGTTCTGCAATGGCACATTGGA
TGCCATCGATGTGTGTTTCCAGCCAGGAAACGCCACAGAATCCATGACCA
GCGACGAGCTGGCAGAGGTCAAAGATTGTTAGAAGCTTTCTAGACCAT
BS28748.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30062-RB | 516 | CG30062-PB | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30062-RB | 610 | CG30062-RB | 17..533 | 17..533 | 2585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13445777..13446293 | 533..17 | 2585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:17:13 has no hits.
BS28748.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:45 Download gff for
BS28748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30062-RB | 17..532 | 17..532 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:22 Download gff for
BS28748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30062-RB | 17..532 | 17..532 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:36 Download gff for
BS28748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30062-RB | 17..532 | 17..532 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:36 Download gff for
BS28748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13445778..13446293 | 17..532 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:22 Download gff for
BS28748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9333283..9333798 | 17..532 | 100 | | Minus |
BS28748.pep Sequence
Translation from 16 to 531
> BS28748.pep
MVRSSWSKVRVLPLLWFLFHGIPLLAIRLQPCELAGQLYILDVPKSELPL
WLCIAEFESRFNTHVVGQANADGSRDYGLFQISDRYWCAPPNRTEYYAFN
DCNVNCTHLLSDDITMAVQCARLIQKQQGWTAWSVYPEFCNGTLDAIDVC
FQPGNATESMTSDELAEVKDC*
BS28748.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30062-PB | 171 | CG30062-PB | 1..171 | 1..171 | 939 | 100 | Plus |
| LysP-PA | 141 | CG9116-PA | 25..141 | 32..151 | 348 | 50.8 | Plus |
| LysB-PB | 140 | CG1179-PB | 15..140 | 23..151 | 342 | 48.1 | Plus |
| LysB-PA | 140 | CG1179-PA | 15..140 | 23..151 | 342 | 48.1 | Plus |
| LysE-PA | 140 | CG1180-PA | 15..140 | 23..151 | 339 | 48.1 | Plus |
