BS28751.complete Sequence
479 bp assembled on 2012-03-26
GenBank Submission: KX805762
> BS28751.complete
GAAGTTATCAGTCGACATGGATGAATTGTCTGTTGAAGAGCAGGACCTGC
TCAAGAATATCTATAGCTTATTGGATAAGGATAACGAAGGTGCCATCACC
TCGAAGGAATTGGGAATGGTAATCCGAGCATTAGGTCGACAGCCCAATGA
ATCGGAGGTTCAGTCCATGATAAACGAGGTGGACTCTGATGGAAACGGAT
CCATTGCAAAGGAGGAGTTTTGCAATGTGATTCTGCGCAAGATGCACGAC
ACAAATAAGGAGGAGGAGCTGCGCGATGCGTTTCGCGTTTTTGATAAGGA
AAACAATGGGTACATCTCCACTACCGAGCTGAGGGCTGTCTTTATGGCAC
TTGGTGAAAAATTGGAAGACGACGAGCTGGAGGAGATGATACGCGAGTAC
GATTTAGATCAGGATAATCACATCAATTTCGAGGAGTTCACCAACATGAT
GACCACGCGTTAAAAGCTTTCTAGACCAT
BS28751.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31960-RA | 447 | CG31960-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
| CG31958-RA | 474 | CG31958-PA | 135..394 | 199..458 | 1225 | 98.1 | Plus |
| CG31958-RA | 474 | CG31958-PA | 1..137 | 17..153 | 655 | 98.5 | Plus |
| CG11165-RA | 447 | CG11165-PA | 55..437 | 71..453 | 625 | 77.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31960-RA | 676 | CG31960-RA | 84..530 | 17..463 | 2235 | 100 | Plus |
| CG31958-RA | 606 | CG31958-RA | 216..475 | 199..458 | 1225 | 98.1 | Plus |
| CG31958-RA | 606 | CG31958-RA | 82..218 | 17..153 | 655 | 98.5 | Plus |
| CG11165-RA | 627 | CG11165-RA | 105..487 | 71..453 | 625 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3785030..3785476 | 17..463 | 2235 | 100 | Plus |
| 2L | 23513712 | 2L | 3785953..3786212 | 199..458 | 1225 | 98.1 | Plus |
| 2L | 23513712 | 2L | 3785819..3785955 | 17..153 | 655 | 98.5 | Plus |
| 2R | 25286936 | 2R | 7949943..7950325 | 71..453 | 625 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:17:57 has no hits.
BS28751.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:51 Download gff for
BS28751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31960-RA | 85..529 | 17..461 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:44 Download gff for
BS28751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31960-RA | 84..528 | 17..461 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:55 Download gff for
BS28751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31960-RA | 84..528 | 17..461 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:55 Download gff for
BS28751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3785030..3785474 | 17..461 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:44 Download gff for
BS28751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3785030..3785474 | 17..461 | 100 | | Plus |
BS28751.pep Sequence
Translation from 16 to 462
> BS28751.pep
MDELSVEEQDLLKNIYSLLDKDNEGAITSKELGMVIRALGRQPNESEVQS
MINEVDSDGNGSIAKEEFCNVILRKMHDTNKEEELRDAFRVFDKENNGYI
STTELRAVFMALGEKLEDDELEEMIREYDLDQDNHINFEEFTNMMTTR*
BS28751.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31960-PA | 148 | CG31960-PA | 1..148 | 1..148 | 753 | 100 | Plus |
| CG31958-PA | 157 | CG31958-PA | 1..131 | 1..147 | 628 | 87.8 | Plus |
| CG11165-PA | 148 | CG11165-PA | 1..148 | 1..148 | 585 | 74.3 | Plus |
| Cam-PD | 149 | CG8472-PD | 3..149 | 2..148 | 439 | 56.5 | Plus |
| Cam-PC | 149 | CG8472-PC | 3..149 | 2..148 | 439 | 56.5 | Plus |
