BS28752.complete Sequence
401 bp assembled on 2012-03-26
GenBank Submission: KX804198
> BS28752.complete
GAAGTTATCAGACGACATGGCTCTTCGTATTATTTTTGTCTTCATTGCCA
CAATCGTCCTGGCGCAAGGATCAAATATTTCGCCAGTTGCGCAGGAGAAT
CTTGTGCGGGTCCATCACTCTGGAGTGGTTTCATCTGGAGCTCCTGCCGT
TGGTGTTACCCAGAGCCGCTCAGTTGTTTCGCAAGCTCAGCGTCCTAACT
ATGGTCAGAGATCCATCTCTGGATCTATCGGAGGATCTCGTCGAGTGGGC
GAAGTTCCAGTGTCCGGATCTCGTCCTCATGGTGGTGCTCCTCGTCGTTC
TTCTGCAAGCGCTTATGCTCGTCCCATCGGAGGTGGAGCTACCCCAGGAT
ATGTCCACCGCAACCGCAACCAGAAACCATATTAGAAGCTTTCTAGACCA
T
BS28752.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:18:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42834-RA | 369 | CG42834-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
CG14332-RA | 375 | CG14332-PA | 194..328 | 210..344 | 225 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:18:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42834-RA | 536 | CG42834-RA | 27..397 | 17..387 | 1855 | 100 | Plus |
CG14332-RA | 513 | CG14332-RA | 220..354 | 210..344 | 225 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:18:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17418785..17419155 | 17..387 | 1855 | 100 | Plus |
3R | 32079331 | 3R | 17421849..17421983 | 344..210 | 225 | 77.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:18:01 has no hits.
BS28752.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:52 Download gff for
BS28752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42834-RA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:46 Download gff for
BS28752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42834-RA | 27..395 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:56 Download gff for
BS28752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42834-RA | 27..395 | 17..385 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:56 Download gff for
BS28752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17418785..17419153 | 17..385 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:46 Download gff for
BS28752.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13244507..13244875 | 17..385 | 100 | | Plus |
BS28752.pep Sequence
Translation from 16 to 384
> BS28752.pep
MALRIIFVFIATIVLAQGSNISPVAQENLVRVHHSGVVSSGAPAVGVTQS
RSVVSQAQRPNYGQRSISGSIGGSRRVGEVPVSGSRPHGGAPRRSSASAY
ARPIGGGATPGYVHRNRNQKPY*
BS28752.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42834-PA | 122 | CG42834-PA | 1..122 | 1..122 | 616 | 100 | Plus |
CG14332-PA | 124 | CG14332-PA | 1..124 | 1..122 | 304 | 54.8 | Plus |
CG33333-PA | 148 | CG33333-PA | 1..88 | 1..103 | 139 | 39.8 | Plus |