BS28754.complete Sequence
443 bp assembled on 2012-03-26
GenBank Submission: KX800260
> BS28754.complete
GAAGTTATCAGTCGACATGTGTTCCAAACTAACTCTTTTCCTGGGGTTAG
TGGCCCTCATTGCTGCTGTCTTTGCTCTTGATGATCCCACATCGCCGACA
TCCCCAACATCTCCAACATCTCCAACTTCGCCGACTTCTCCAACTTCGCC
GACTTCTCCAACTTCTCCCACTTCTCCTACATCACCAACTTCACCAACAA
CGCCAGATGCCTCTACTGCCACCACTGCCGCCCCCTCTACGGCATCCACT
ACCACAGAAAGGACTCGCAGACGCAGGCGCAGGCGCAGGATAATCCGGAT
CCGCAGGTTCAGGGGCGGCAACCGCCGTCGTGGATTCGGTAGACGCAGAT
TCGGTGGTCGCCGGTTCGGTGAGGGAGGTGTCCGTGAAGTCGTGATCCGT
GAGCGCGGATTGGAGCGCCTCCTTTAAAAGCTTTCTAGACCAT
BS28754.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:18:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32198-RB | 411 | CG32198-PB | 1..411 | 17..427 | 2055 | 100 | Plus |
CG15741-RA | 408 | CG15741-PA | 109..161 | 125..177 | 175 | 88.7 | Plus |
CG15741-RA | 408 | CG15741-PA | 121..167 | 119..165 | 175 | 91.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:18:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32198-RB | 470 | CG32198-RB | 15..425 | 17..427 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:18:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18526990..18527400 | 17..427 | 2055 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:18:08 has no hits.
BS28754.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:53 Download gff for
BS28754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 1..409 | 17..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:50 Download gff for
BS28754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 15..423 | 17..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:00 Download gff for
BS28754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 15..423 | 17..425 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:00 Download gff for
BS28754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18526990..18527398 | 17..425 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:50 Download gff for
BS28754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18520090..18520498 | 17..425 | 100 | | Plus |
BS28754.pep Sequence
Translation from 16 to 426
> BS28754.pep
MCSKLTLFLGLVALIAAVFALDDPTSPTSPTSPTSPTSPTSPTSPTSPTS
PTSPTSPTSPTTPDASTATTAAPSTASTTTERTRRRRRRRRIIRIRRFRG
GNRRRGFGRRRFGGRRFGEGGVREVVIRERGLERLL*
BS28754.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32198-PB | 136 | CG32198-PB | 1..136 | 1..136 | 691 | 100 | Plus |
CG12522-PA | 137 | CG12522-PA | 5..132 | 5..134 | 198 | 45.2 | Plus |
CG15741-PA | 135 | CG15741-PA | 6..107 | 12..105 | 187 | 42.2 | Plus |
CG32071-PA | 150 | CG32071-PA | 15..149 | 5..134 | 184 | 44.4 | Plus |
CG15741-PA | 135 | CG15741-PA | 7..106 | 7..105 | 173 | 43 | Plus |
nol-PA | 130 | CG32077-PA | 1..120 | 1..116 | 172 | 33.1 | Plus |