BS28755.complete Sequence
566 bp assembled on 2012-03-26
GenBank Submission: KX802895
> BS28755.complete
GAAGTTATCAGTCGACATGTGCAAGTTCACCAACCGGCTGTTTGTGTTCG
CCCTGCTGCTTGTGGCACTTGGAAGAATTCTGGCCCAGCCCGTTGGCGGC
AAGACTAGGCCAGGGAATTCGAGGAACGTGATCAGCGACTTGCTGGACGT
CTTATACGACGACTATTCCGAGAATGGTTTTCAGCGCGAGGACATTCTAT
ACGACCAACGGCAAAAGGGTGGGGAGAACTATCAGTTCAAAGTGGATGGG
GTCGTCATCGGAATGGCGCCTCAAATGAGCTCCAGCTTGCTCTACTCCAT
GGCAGAGTCCTACTTGAGTGAAATGTTGTTGCGCCAATCTACACCGGATC
CAGATTCAACTCAGATGTACGAGAGGGATCCTGAGACCGACACAGACTCT
GGTTCCACCGAGGGCGTAACTAAGATTCCTGAGCTAGCCCAGATTAATTT
GGAAAGCAGACAACATCAAATTGTAGCTTCTCAAACTGCCAGCCGATCTC
CAACTCAACTGCTCCAATTGCTTAAGATGCTCAAAAGTTCTAAGGCCTAA
AAGCTTTCTAGACCAT
BS28755.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13081-RB | 534 | CG13081-PB | 1..534 | 17..550 | 2670 | 100 | Plus |
| CG13081-RA | 534 | CG13081-PA | 1..534 | 17..550 | 2670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:18:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13081-RB | 817 | CG13081-RB | 86..622 | 16..552 | 2685 | 100 | Plus |
| CG13081-RA | 703 | CG13081-RA | 86..622 | 16..552 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:18:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19540692..19540997 | 16..321 | 1530 | 100 | Plus |
| 2L | 23513712 | 2L | 19541049..19541226 | 318..495 | 890 | 100 | Plus |
| 2L | 23513712 | 2L | 19541288..19541345 | 495..552 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:18:12 has no hits.
BS28755.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:54 Download gff for
BS28755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13081-RA | 1..532 | 17..548 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:52 Download gff for
BS28755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13081-RA | 87..618 | 17..548 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:02 Download gff for
BS28755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13081-RA | 87..618 | 17..548 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:02 Download gff for
BS28755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19540693..19540993 | 17..317 | 100 | -> | Plus |
| 2L | 19541049..19541226 | 318..495 | 100 | -> | Plus |
| 2L | 19541289..19541341 | 496..548 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:52 Download gff for
BS28755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19540693..19540993 | 17..317 | 100 | -> | Plus |
| arm_2L | 19541049..19541226 | 318..495 | 100 | -> | Plus |
| arm_2L | 19541289..19541341 | 496..548 | 100 | | Plus |
BS28755.pep Sequence
Translation from 16 to 549
> BS28755.pep
MCKFTNRLFVFALLLVALGRILAQPVGGKTRPGNSRNVISDLLDVLYDDY
SENGFQREDILYDQRQKGGENYQFKVDGVVIGMAPQMSSSLLYSMAESYL
SEMLLRQSTPDPDSTQMYERDPETDTDSGSTEGVTKIPELAQINLESRQH
QIVASQTASRSPTQLLQLLKMLKSSKA*
BS28755.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13081-PB | 177 | CG13081-PB | 1..177 | 1..177 | 889 | 100 | Plus |
| CG13081-PA | 177 | CG13081-PA | 1..177 | 1..177 | 889 | 100 | Plus |
