BS28758.complete Sequence
377 bp assembled on 2012-03-26
GenBank Submission: KX801645
> BS28758.complete
GAAGTTATCAGTCGACATGCGATCCCAGCTAACTATCTTCCTTGCCATCG
CGGCTTTCGTTTCGACTGCCTGGGCACTGACTTCTCCCGCCACGGTCACT
GTTTCATCGGTCACTGTTTCATCGGTCACTATTCCATCGGTCACTATTCC
TTCGGTCACTATTCCGACCACTGATACAGACACGTCCACCACTTCGCCTT
CGGCAACCGGAAGCAGCACCACCGTGACTCCCACCACCAAGAAACCAAAG
AAGAAGGCTACCGTTGTCCACTACAAGAAGAAGACCCACAAGTCGAACCG
ACGCCGCAAGTTCCGCCACTCACGTGATGGAAAGAGGAAGAACCGATCGA
GTTGGGAATAAAAGCTTTCTAGACCAT
BS28758.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:17:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14143-RA | 345 | CG14143-PA | 1..345 | 17..361 | 1725 | 100 | Plus |
CG32074-RA | 333 | CG32074-PA | 1..333 | 17..361 | 1250 | 92 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:17:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14143-RA | 494 | CG14143-RA | 11..355 | 17..361 | 1725 | 100 | Plus |
CG32074-RA | 440 | CG32074-RA | 3..335 | 17..361 | 1250 | 92 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:17:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11134997..11135341 | 17..361 | 1725 | 100 | Plus |
3L | 28110227 | 3L | 11131988..11132320 | 361..17 | 1250 | 92 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:17:45 has no hits.
BS28758.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:49 Download gff for
BS28758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 1..343 | 17..359 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:37 Download gff for
BS28758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 11..353 | 17..359 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:50 Download gff for
BS28758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 11..353 | 17..359 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:50 Download gff for
BS28758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11134997..11135339 | 17..359 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:37 Download gff for
BS28758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11128097..11128439 | 17..359 | 100 | | Plus |
BS28758.pep Sequence
Translation from 16 to 360
> BS28758.pep
MRSQLTIFLAIAAFVSTAWALTSPATVTVSSVTVSSVTIPSVTIPSVTIP
TTDTDTSTTSPSATGSSTTVTPTTKKPKKKATVVHYKKKTHKSNRRRKFR
HSRDGKRKNRSSWE*
BS28758.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14143-PA | 114 | CG14143-PA | 1..114 | 1..114 | 572 | 100 | Plus |
CG32074-PA | 110 | CG32074-PA | 1..110 | 1..114 | 501 | 91.3 | Plus |
nol-PA | 130 | CG32077-PA | 1..123 | 1..110 | 276 | 53.7 | Plus |
CG33267-PB | 94 | CG33267-PB | 18..91 | 27..104 | 137 | 37.2 | Plus |