BS28761.complete Sequence
491 bp assembled on 2012-03-26
GenBank Submission: KX802874
> BS28761.complete
GAAGTTATCAGTCGACATGTACTGGATTTTGCTGTTGACGTCTCTCTTGC
CATGGCATCCCCATGCAACTGCCCAATTTCTGGAACCCGATTGTGGATAT
ATGTCACCGGAGGCACTCCAAAATGAGGAGCACCAGGCGCACATATCCGA
GAGTCCTTGGATGGCTTACTTGCACAAATCTGGCGAGCTTGTATGTGGCG
GAACTCTCGTAAATCATCGATTCATCCTGACAGCAGCACATTGCATACGA
GAGGATGAAAACTTGACTGTGCGACTGGGCGAGTTCAACAGCTTAACTAG
TATCGACTGCAACGGCTCCGATTGCCTGCCACCTTCCGAGGATTTTGAAA
TAGATGTGGCCTTCAGGCATGGGGGCTATTCCAGAACCAATAGGATCCAC
GACATTGGACTTCTCCGGCTGGCCAAGTCGGTGGAGTATAAAGGTTCAAG
ATACATAGATGGCACACATGTATAGAAGCTTTCTAGACCAT
BS28761.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:18:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30286-RC | 459 | CG30286-PC | 1..459 | 17..475 | 2295 | 100 | Plus |
| CG30286-RB | 834 | CG30286-PB | 1..427 | 17..443 | 2135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:18:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30286-RC | 967 | CG30286-RC | 12..471 | 17..476 | 2300 | 100 | Plus |
| CG30286-RB | 904 | CG30286-RB | 12..438 | 17..443 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21536212..21536423 | 476..265 | 1060 | 100 | Minus |
| 2R | 25286936 | 2R | 21536582..21536784 | 219..17 | 1015 | 100 | Minus |
| 2R | 25286936 | 2R | 21536481..21536527 | 265..219 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:18:28 has no hits.
BS28761.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:56 Download gff for
BS28761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30286-RC | 12..470 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:02 Download gff for
BS28761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30286-RC | 12..470 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:08 Download gff for
BS28761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30286-RC | 12..470 | 17..475 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:08 Download gff for
BS28761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21536213..21536423 | 265..475 | 100 | <- | Minus |
| 2R | 21536482..21536527 | 219..264 | 100 | <- | Minus |
| 2R | 21536583..21536784 | 17..218 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:02 Download gff for
BS28761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17423718..17423928 | 265..475 | 100 | <- | Minus |
| arm_2R | 17423987..17424032 | 219..264 | 100 | <- | Minus |
| arm_2R | 17424088..17424289 | 17..218 | 100 | | Minus |
BS28761.pep Sequence
Translation from 16 to 474
> BS28761.pep
MYWILLLTSLLPWHPHATAQFLEPDCGYMSPEALQNEEHQAHISESPWMA
YLHKSGELVCGGTLVNHRFILTAAHCIREDENLTVRLGEFNSLTSIDCNG
SDCLPPSEDFEIDVAFRHGGYSRTNRIHDIGLLRLAKSVEYKGSRYIDGT
HV*
BS28761.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30286-PC | 152 | CG30286-PC | 1..152 | 1..152 | 830 | 100 | Plus |
| CG30286-PB | 277 | CG30286-PB | 1..142 | 1..142 | 775 | 100 | Plus |
| CG30090-PA | 291 | CG30090-PA | 23..147 | 20..142 | 313 | 45.6 | Plus |
| CG33462-PA | 300 | CG33462-PA | 25..142 | 22..141 | 299 | 44.2 | Plus |
| CG30082-PB | 280 | CR30082-PB | 5..148 | 3..142 | 287 | 41.7 | Plus |
