Clone BS28769 Report

Search the DGRC for BS28769

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:287
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG11029-RA
Protein status:BS28769.pep: full length peptide match
Sequenced Size:1376

Clone Sequence Records

BS28769.complete Sequence

1376 bp assembled on 2012-03-26

GenBank Submission: KX803005

> BS28769.complete
GAAGTTATCAGTCGACATGGCTAGCATTACCTATGCATTGTGTCTGTGCT
CGTTGTTTATATTATTCTCGCCTCTTGTGTCCGCGAATCGGCGTGTCCGG
CGACAAAATCGATCCGATCGCCTGCTGGCCGACATCGGAGTACGTGCCCA
GTCCTACGATCCCCGTGTGCCGGAAAATGGCATTCAGCAGTACACCGACA
TCGACCAGGATCTGCGCCATCTGTTCCTGAACACCAGGCAGACCACGCTG
AAATGGGCCCTTAACAACATCGAGGCGCTGAGCAGTCGCGGCAGACGCGA
GGGAAAGCTCCAGGCTCCGGTGTCCAAGAAGGTGCCCTTCCTGTGTCCCA
CTAACAACACACGCTCCCCGAGTCCGCCCACTTCCATAGAGCACCTCAGG
CCGGGTGATATTGACATCATAGCTGCCTTTGGCGACTCCCTGTCCGCAGG
CAACGGAATACTTTCCAACAATGCCATCGACATGATCAACGAGTTCCGTG
GTCTGACCTTCTCCGGTGGCGGTCTGGCCAACTGGCGAAGATTCGTCACC
CTGCCGAACATCCTGAAGATCTTTAATCCCAAACTGTACGGTTTCGCGGT
GAGCAACAGCCTGGTGATCAACCACCGATCGTCGCGACTTAACATCGCCG
AGCCGATGATCATGTCGCGGGATCTGCCCTTCCAGGCTCGCGTACTCATC
GATCTGCTGCGACGCGATCGCCATGTGGACATGAAGCGGCACTGGAAGCT
GTTGACAGTGTATGTGGGAAACAACGACATCTGCTCCGACCTGTGTCACT
GGGACACGCCGCAGAGCTTCCTCGATCAGCACGCCCGCGATCTGCGCCAG
GCATTCCGGCTGCTGCGCGACCATGTGCCGCGCCTGCTTATCAATTTAAT
TGTGGTGCCAAACATCCCGCTGGTGTTGAGCACCATGACCAAAGTGCCGC
TGCAGTGCTTCGTGGTGCATCGTGTGGGGTGCCACTGTCTGATCAACGAC
CGCCTGAACCGCACCGAGTTCAATGAGCGCATGGACACCCTGACGCGTTG
GCAGCAGCTGGACATGGAGATCGCCCGGCTGCCGGAGTTCCGTCGCCAGG
ACTTCGCCATCGTCGCCCATCCGATGCTGACCAAACTAACTGCTCCCACT
TTGCCCGATGGGAGCACGGACTGGAGGTTCTTCTCTCACGACTGCTTCCA
TTTTAGCCAGCGCGGCCACGCGATCATCTCGAACCTGTTGTGGAACAGCA
TGCTCCTGCCGGACGACCAGAAGCCACGACCTTCGGTGGTGCCCGAGCTG
TTCGAGCGGGTCGTTTGCCCCACTGCGGAGCAGCCCTACCTTGTGGTCAG
GCCAAGTTGAAAGCTTTCTAGACCAT

BS28769.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11029-RA 1344 CG11029-PA 1..1344 17..1360 6720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG11029-RA 1805 CG11029-RA 117..1464 13..1360 6725 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:20:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5746273..5747620 13..1360 6725 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 04:20:04 has no hits.

BS28769.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 14:32:02 Download gff for BS28769.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 1..1343 17..1359 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:01 Download gff for BS28769.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 121..1463 17..1359 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:53 Download gff for BS28769.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 121..1463 17..1359 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:53 Download gff for BS28769.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5746277..5747619 17..1359 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:01 Download gff for BS28769.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5746277..5747619 17..1359 100   Plus

BS28769.pep Sequence

Translation from 16 to 1359

> BS28769.pep
MASITYALCLCSLFILFSPLVSANRRVRRQNRSDRLLADIGVRAQSYDPR
VPENGIQQYTDIDQDLRHLFLNTRQTTLKWALNNIEALSSRGRREGKLQA
PVSKKVPFLCPTNNTRSPSPPTSIEHLRPGDIDIIAAFGDSLSAGNGILS
NNAIDMINEFRGLTFSGGGLANWRRFVTLPNILKIFNPKLYGFAVSNSLV
INHRSSRLNIAEPMIMSRDLPFQARVLIDLLRRDRHVDMKRHWKLLTVYV
GNNDICSDLCHWDTPQSFLDQHARDLRQAFRLLRDHVPRLLINLIVVPNI
PLVLSTMTKVPLQCFVVHRVGCHCLINDRLNRTEFNERMDTLTRWQQLDM
EIARLPEFRRQDFAIVAHPMLTKLTAPTLPDGSTDWRFFSHDCFHFSQRG
HAIISNLLWNSMLLPDDQKPRPSVVPELFERVVCPTAEQPYLVVRPS*

BS28769.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11029-PA 447 CG11029-PA 1..447 1..447 2359 100 Plus
CG7365-PB 424 CG7365-PB 23..411 58..445 734 38.9 Plus
CG7365-PA 424 CG7365-PA 23..411 58..445 734 38.9 Plus