Clone BS28770 Report

Search the DGRC for BS28770

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:287
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG32141-RA
Protein status:BS28770.pep: full length peptide match
Sequenced Size:749

Clone Sequence Records

BS28770.complete Sequence

749 bp assembled on 2012-03-26

GenBank Submission: KX800807

> BS28770.complete
GAAGTTATCAGTCGACATGTGGAACTATCGTCAGAAAGTTGATTTGGAAA
CATCGGTAAAGATATCGCCGTATTGCAATTCTTGGCCATCGGCTTGTTGG
TTTACTCTTAAAGGCATTGATTTGTTGAAACTTCTGGTATTGGAAAGATC
ACCAACTTACCTGGTGATTCTTACGATTGTCCTTATCGTACTCCTCTTAC
TTGTATTTAAAAGATTCAAACACAAATGGAACGATGTGCCTATGTCGGAG
ATTGAGTCACTGAGAAAACGTGTTAAGTTTGTAACCAAGGATATGGCCAT
GCTGCAAGAAGCCCTAAATTCGACCGTAATACCCAAGCCGCCGCTAGCGA
TTTCTGATGATATTAGGAGTAATATTAATTACTTGGATGAACCAGAGTCC
AACGCAAATGATGACAAACTTTCAGAATTTAAAGAAATCTTTGATCCTTT
CCCCCCAGAATTCGACAAAATTAGTGAAACTAAAGCGCTAGTACGAGAAG
AAAATAAACCGGAGCCTGTGATTCCAGACGCCGAACCTCGAGAAGATTCC
GTAGTAAAAAATAGGGTGCGATTTGCTCTAACAGATCAGGGAAAACCAGC
CAAAGATGAGACCAAGCACATTAATATAGCGAAACCCACGAAGATTATAG
CTGAAAATAATGTATCCGTGGAAAATAGAAATATGCGTAAACGGTCATCT
CCTTCAAACACGAAAACGGGATGGAAGCTCTAGAAGCTTTCTAGACCAT

BS28770.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32141-RA 717 CG32141-PA 1..717 17..733 3585 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32141-RA 913 CG32141-RA 112..829 17..734 3590 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14203712..14204210 236..734 2495 100 Plus
3L 28110227 3L 14203434..14203654 17..237 1105 100 Plus
Blast to na_te.dros performed 2014-11-28 04:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
1731 4648 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). 766..816 396..447 113 71.2 Plus

BS28770.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:55 Download gff for BS28770.complete
Subject Subject Range Query Range Percent Splice Strand
CG32141-RA 1..717 17..733 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:57 Download gff for BS28770.complete
Subject Subject Range Query Range Percent Splice Strand
CG32141-RA 112..828 17..733 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:05 Download gff for BS28770.complete
Subject Subject Range Query Range Percent Splice Strand
CG32141-RA 112..828 17..733 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:05 Download gff for BS28770.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14203434..14203652 17..235 100 -> Plus
3L 14203712..14204209 236..733 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:57 Download gff for BS28770.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14196534..14196752 17..235 100 -> Plus
arm_3L 14196812..14197309 236..733 100   Plus

BS28770.pep Sequence

Translation from 16 to 732

> BS28770.pep
MWNYRQKVDLETSVKISPYCNSWPSACWFTLKGIDLLKLLVLERSPTYLV
ILTIVLIVLLLLVFKRFKHKWNDVPMSEIESLRKRVKFVTKDMAMLQEAL
NSTVIPKPPLAISDDIRSNINYLDEPESNANDDKLSEFKEIFDPFPPEFD
KISETKALVREENKPEPVIPDAEPREDSVVKNRVRFALTDQGKPAKDETK
HINIAKPTKIIAENNVSVENRNMRKRSSPSNTKTGWKL*

BS28770.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32141-PA 238 CG32141-PA 1..238 1..238 1234 100 Plus