BS28770.complete Sequence
749 bp assembled on 2012-03-26
GenBank Submission: KX800807
> BS28770.complete
GAAGTTATCAGTCGACATGTGGAACTATCGTCAGAAAGTTGATTTGGAAA
CATCGGTAAAGATATCGCCGTATTGCAATTCTTGGCCATCGGCTTGTTGG
TTTACTCTTAAAGGCATTGATTTGTTGAAACTTCTGGTATTGGAAAGATC
ACCAACTTACCTGGTGATTCTTACGATTGTCCTTATCGTACTCCTCTTAC
TTGTATTTAAAAGATTCAAACACAAATGGAACGATGTGCCTATGTCGGAG
ATTGAGTCACTGAGAAAACGTGTTAAGTTTGTAACCAAGGATATGGCCAT
GCTGCAAGAAGCCCTAAATTCGACCGTAATACCCAAGCCGCCGCTAGCGA
TTTCTGATGATATTAGGAGTAATATTAATTACTTGGATGAACCAGAGTCC
AACGCAAATGATGACAAACTTTCAGAATTTAAAGAAATCTTTGATCCTTT
CCCCCCAGAATTCGACAAAATTAGTGAAACTAAAGCGCTAGTACGAGAAG
AAAATAAACCGGAGCCTGTGATTCCAGACGCCGAACCTCGAGAAGATTCC
GTAGTAAAAAATAGGGTGCGATTTGCTCTAACAGATCAGGGAAAACCAGC
CAAAGATGAGACCAAGCACATTAATATAGCGAAACCCACGAAGATTATAG
CTGAAAATAATGTATCCGTGGAAAATAGAAATATGCGTAAACGGTCATCT
CCTTCAAACACGAAAACGGGATGGAAGCTCTAGAAGCTTTCTAGACCAT
BS28770.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32141-RA | 717 | CG32141-PA | 1..717 | 17..733 | 3585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:18:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32141-RA | 913 | CG32141-RA | 112..829 | 17..734 | 3590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:18:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14203712..14204210 | 236..734 | 2495 | 100 | Plus |
3L | 28110227 | 3L | 14203434..14203654 | 17..237 | 1105 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:18:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 766..816 | 396..447 | 113 | 71.2 | Plus |
BS28770.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:55 Download gff for
BS28770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 1..717 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:57 Download gff for
BS28770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 112..828 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:05 Download gff for
BS28770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 112..828 | 17..733 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:05 Download gff for
BS28770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14203434..14203652 | 17..235 | 100 | -> | Plus |
3L | 14203712..14204209 | 236..733 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:57 Download gff for
BS28770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14196534..14196752 | 17..235 | 100 | -> | Plus |
arm_3L | 14196812..14197309 | 236..733 | 100 | | Plus |
BS28770.pep Sequence
Translation from 16 to 732
> BS28770.pep
MWNYRQKVDLETSVKISPYCNSWPSACWFTLKGIDLLKLLVLERSPTYLV
ILTIVLIVLLLLVFKRFKHKWNDVPMSEIESLRKRVKFVTKDMAMLQEAL
NSTVIPKPPLAISDDIRSNINYLDEPESNANDDKLSEFKEIFDPFPPEFD
KISETKALVREENKPEPVIPDAEPREDSVVKNRVRFALTDQGKPAKDETK
HINIAKPTKIIAENNVSVENRNMRKRSSPSNTKTGWKL*
BS28770.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32141-PA | 238 | CG32141-PA | 1..238 | 1..238 | 1234 | 100 | Plus |