BS28776.complete Sequence
1958 bp assembled on 2012-04-06
GenBank Submission: KX803768
> BS28776.complete
GAAGTTATCAGTCGACATGCCTGCTATTGGAATCGATCTGGGCACCACCT
ACTCCTGCGTGGGTGTCTACCAGCATGGCAAGGTTGAGATTATCGCCAAT
GACCAGGGCAACCGCACCACGCCGTCCTACGTGGCTTTCACAGACTCGGA
ACGCCTCATTGGTGATCCGGCCAAGAACCAGGTGGCCATGAACCCCAGAA
ACACAGTGTTTGACGCCAAGCGACTCATCGGCCGAAAATACGACGATCCC
AAAATCGCAGAGGACATGAAGCACTGGCCTTTCAAAGTTGTAAGCGACGG
CGGAAAGCCCAAGATCGGGGTGGAGTATAAGGGTGAGTCCAAGAGATTTG
CTCCCGAGGAGATCAGTTCGATGGTGCTGACCAAGATGAAGGAGACGGCG
GAGGCGTATCTGGGCGAGAGCATCACGGATGCAGTCATCACAGTTCCAGC
TTACTTCAACGACTCTCAGCGCCAGGCTACCAAAGACGCCGGTCACATCG
CCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCAGCATTG
GCCTACGGACTGGACAAGAATCTCAAGGATGAGCGCAATGTGCTTATCTT
CGACTTGGGCGGCGGCACCTTCGATGTCTCCATCCTGACCATCGACGAGG
GATCTCTGTTCGAGGTGCGCTCCACAGCCGGAGACACACACTTGGGCGGC
GAGGACTTTGACAACCGGCTAGTCACCCACCTGGCGGAGGAGTTCAAGCG
CAAGTACAAGAAGGATCTGCGCTCCAACCCTCGCGCCCTACGACGCCTCA
GAACAGCAGCTGAACGGGCCAAGCGCACACTCTCCTCTAGCACGGAGGCC
ACCATCGAGATCGACGCATTGTTTGAGGGCCAAGACTTCTACACCAAAGT
AAGCCGTGCCAGGTTTGAGGAGCTGTGCGCGGACCTCTTCCGCAACACCC
TGCAGCCTGTGGAGAAGGCCCTCAACGATGCCAAGATGGACAAGGGTCAG
ATCCACGACATCGTGCTCGTCGGCGGATCCACTCGCATTCCCAAGGTGCA
AAGTCTGCTGCAGGAGTTCTTCCACGGCAAGAACCTCAACCTATCCATCA
ACCCAGACGAGGCAGTGGCATACGGAGCTGCTGTGCAGGCCGCTATCCTC
AGCGGAGACCAGAGCGGCAAGATCCAGGACGTGCTGCTGGTGGACGTGGC
CCCACTTTCATTGGGAATTGAGACCGCTGGAGGTGTAATGACCAAGCTGA
TCGAGCGCAACTGTCGCATTCCGTGCAAGCAGACTAAGACGTTCTCCACG
TACTCGGACAACCAGCCCGGAGTCTCCATCCAGGTGTATGAGGGCGAACG
TGCGATGACGAAGGACAACAATGCATTGGGCACCTTCGATCTGTCCGGCA
TTCCACCTGCACCAAGGGGTGTGCCCCAGATAGAAGTAACCTTCGACTTG
GACGCCAATGGAATCCTGAACGTCAGCGCCAAGGAGATGAGCACGGGCAA
GGCCAAGAACATCACGATCAAGAACGACAAGGGACGCCTCTCGCAGGCCG
AGATTGATCGCATGGTGAACGAGGCTGAGAAGTACGCCGACGAGGACGAA
AAGCATCGCCAGCGCATAACCTCTAGAAATGCTCTGGAGAGCTACGTATT
CAACGTAAAGCAGTCCGTGGAGCAGGCGCCCGCTGGCAAACTGGACGAGG
CCGACAAGAACTCCGTCCTGGACAAGTGCAACGAAACTATTCGATGGCTG
GACAGCAACACCACCGCCGAGAAGGAGGAGTTCGACCACAAGATGGAGGA
GCTCACTCGCCACTGCTCCCCTATCATGACCAAGATGCATCAGCAGGGAG
CGGGAGCAGCTGGGGGTCCGGGAGCCAACTGTGGCCAACAGGCCGGAGGA
TTTGGCGGCTACTCTGGACCCACAGTCGAGGAGGTCGACTAAAAGCTTTC
TAGACCAT
BS28776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Bbb-RA | 1926 | CG5834-PA | 1..1926 | 17..1942 | 9630 | 100 | Plus |
| Hsp70Bb-RA | 1926 | CG31359-PA | 1..1926 | 17..1942 | 9585 | 99.8 | Plus |
| Hsp70Bc-RA | 1926 | CG6489-PA | 1..1926 | 17..1942 | 9570 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Bbb-RA | 2347 | CG5834-RA | 243..2169 | 17..1943 | 9635 | 100 | Plus |
| Hsp70Bb-RA | 2347 | CG31359-RA | 243..2169 | 17..1943 | 9590 | 99.8 | Plus |
| Hsp70Bc-RA | 2386 | CG6489-RA | 243..2169 | 17..1943 | 9575 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12502752..12504678 | 17..1943 | 9635 | 100 | Plus |
| 3R | 32079331 | 3R | 12506035..12507961 | 17..1943 | 9590 | 99.8 | Plus |
| 3R | 32079331 | 3R | 12509318..12511244 | 17..1943 | 9575 | 99.8 | Plus |
| 3R | 32079331 | 3R | 12465631..12467557 | 1943..17 | 9545 | 99.7 | Minus |
| 3R | 32079331 | 3R | 11954361..11956289 | 1942..17 | 8515 | 96.2 | Minus |
| 3R | 32079331 | 3R | 11958789..11960717 | 17..1942 | 8515 | 96.2 | Plus |
| 3R | 32079331 | 3R | 24055507..24057104 | 1614..17 | 3130 | 79.7 | Minus |
| 3R | 32079331 | 3R | 15244372..15245954 | 20..1605 | 1985 | 75.2 | Plus |
| 3R | 32079331 | 3R | 13045581..13047002 | 178..1599 | 1485 | 73.6 | Plus |
| 3L | 28110227 | 3L | 13975966..13977280 | 262..1579 | 885 | 71.3 | Plus |
| 3L | 28110227 | 3L | 13974590..13974767 | 27..204 | 440 | 83.1 | Plus |
| X | 23542271 | X | 11803871..11804160 | 645..353 | 425 | 77.1 | Minus |
| 3R | 32079331 | 3R | 13044979..13045131 | 32..184 | 360 | 82.4 | Plus |
| X | 23542271 | X | 11803040..11803615 | 1485..904 | 355 | 71.1 | Minus |
| 2R | 25286936 | 2R | 14254844..14254973 | 567..438 | 290 | 81.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:28:35 has no hits.
BS28776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:47:05 Download gff for
BS28776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Bbb-RA | 243..2166 | 17..1940 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:22 Download gff for
BS28776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Bbb-RA | 243..2166 | 17..1940 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:44 Download gff for
BS28776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Bbb-RA | 243..2166 | 17..1940 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:44 Download gff for
BS28776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12502752..12504675 | 17..1940 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:22 Download gff for
BS28776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8328474..8330397 | 17..1940 | 100 | | Plus |
BS28776.pep Sequence
Translation from 16 to 1941
> BS28776.pep
MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGD
PAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKI
GVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDS
QRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKDERNVLIFDLGGG
TFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKD
LRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARF
EELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQE
FFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLG
IETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKD
NNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNIT
IKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQS
VEQAPAGKLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHC
SPIMTKMHQQGAGAAGGPGANCGQQAGGFGGYSGPTVEEVD*
BS28776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Bbb-PA | 641 | CG5834-PA | 1..641 | 1..641 | 3293 | 100 | Plus |
| Hsp70Bc-PA | 641 | CG6489-PA | 1..641 | 1..641 | 3286 | 99.8 | Plus |
| Hsp70Bb-PA | 641 | CG31359-PA | 1..641 | 1..641 | 3286 | 99.8 | Plus |
| Hsp70Ba-PA | 641 | CG31449-PA | 1..641 | 1..641 | 3278 | 99.5 | Plus |
| Hsp70Ab-PA | 642 | CG18743-PA | 1..642 | 1..641 | 3256 | 98.8 | Plus |
