BS28784.complete Sequence
479 bp assembled on 2012-03-26
GenBank Submission: KX803174
> BS28784.complete
GAAGTTATCAGTCGACATGTGGCCCATTTGGCTGCTGGTGCTCTTAACGC
TATCACTGGCCACTGGCCGCCAGGTGGGCAGATGCAGTTTGGCCCGGCAG
CTGTATCGATACGGAATGGCTTACAACGAGCTACCCGATTGGCTGTGCCT
CGTGGAGGGCGAGAGCTCGTTCAACACAAAAGCCATCAATCCCTCGAACG
TTGATGGATCCGTGGACTGGGGTCTCTTCCAGATCAACGATCGTTACTGG
TGCAAGCCGGCGGATGGTCGTCCATCCAACGATCTGTGTCGCTTGCCCTG
CCGCCTGCTGTTGAGCGACGATATCCGGTATTCCATTGCCTGTGCGAAGT
ACATCAGGAAACAGCAAGGATTCTCCGCCTGGGTGGCTTGGAACAATCGA
TGTCAGGGTGTCAAGCCCAATGTGAATCACTGCTTCCGGCGGCGACACAG
AAATTCGGGTTGAAAGCTTTCTAGACCAT
BS28784.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:18:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7798-RA | 447 | CG7798-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:18:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7798-RA | 516 | CG7798-RA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:18:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16222181..16222627 | 463..17 | 2235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:18:43 has no hits.
BS28784.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:58 Download gff for
BS28784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7798-RA | 1..446 | 17..462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:10 Download gff for
BS28784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7798-RA | 1..446 | 17..462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:16 Download gff for
BS28784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7798-RA | 1..446 | 17..462 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:16 Download gff for
BS28784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16222182..16222627 | 17..462 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:10 Download gff for
BS28784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12109687..12110132 | 17..462 | 100 | | Minus |
BS28784.pep Sequence
Translation from 16 to 462
> BS28784.pep
MWPIWLLVLLTLSLATGRQVGRCSLARQLYRYGMAYNELPDWLCLVEGES
SFNTKAINPSNVDGSVDWGLFQINDRYWCKPADGRPSNDLCRLPCRLLLS
DDIRYSIACAKYIRKQQGFSAWVAWNNRCQGVKPNVNHCFRRRHRNSG*
BS28784.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:11:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7798-PA | 148 | CG7798-PA | 1..148 | 1..148 | 828 | 100 | Plus |
LysP-PA | 141 | CG9116-PA | 12..141 | 10..140 | 349 | 47.3 | Plus |
LysB-PB | 140 | CG1179-PB | 5..140 | 7..140 | 337 | 46 | Plus |
LysB-PA | 140 | CG1179-PA | 5..140 | 7..140 | 337 | 46 | Plus |
LysD-PA | 140 | CG9118-PA | 5..140 | 4..140 | 334 | 45.3 | Plus |