Clone BS28791 Report

Search the DGRC for BS28791

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:287
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG32182-RA
Protein status:BS28791.pep: gold
Sequenced Size:1292

Clone Sequence Records

BS28791.complete Sequence

1292 bp assembled on 2012-03-26

GenBank Submission: KX804303

> BS28791.complete
GAAGTTATCAGTCGACATGCGATTTAAGACGAGTATAACCATTGGCCACG
GAGAGCCACCCAGGAATCGGCGGCTAATGGAGCTGGACGACGACTGTCTG
CTAATGATTTGCGAACATCTAGCGCTGGGAGACCAACTGAGACTGATGGA
GGTGCAGGAGGAACGATTTTCGAGCTTGATACTGCAATTGTGGTCCAACA
GATACGCCAAGCTATTTGATTTTCGCCGGGAGCAGCAATTAAACCTGCTA
AAGCCCGACGAGCTGGCTCAAATATTGGATCACTTAGGCTGGCGAACAAG
AGCGTTAATTAACCTGCCAGGTACAGGCGAAGGATGCCGGAAGTGGCTCA
AGCGGATGCGACAAAGCCTCAACCATTTGCAGATACTCAGTTTCACGAAA
AGCAATACATTGGTAATACAGAAACTCCCCTACCTGTGCCCCAATGTGGT
GGACCTTAAGCTTGGCGAGTGCGAGGGTTTAACACCCCTTGATGTGGATT
TCATGTTTGAAAACCTTAAAAACCTAAGAGAATTTGAAATGCGCTCTAGT
TGGAACTGCAGCCAACAGAGGTACCAGTATCCCAGAAATCTGGAGATCCT
GAAACTACCAGCTTGTATGATTACCGCCTGTGTTTCTCAGATCTTTCAAT
TGCCCCGACTCCGTCTATTGACAGCTTTTCTGTGTCGAAATTCCGAGCAC
GGCCACCTGGACAATGATGGCAAGGCGAATTGCAGTGGCACAGGAACTTT
GTCCGCGTGCCTGCAGCAAATTCGAGGTCGCAATTGTCGGATTGTGGGTC
TCCGTTTGCAGTGTCGACTGGATGACTGCCTGCCAGTCGTCGACGTGAAG
GAGGTATTCCGGCTGCAATCCTTTGCTTGGCACTCGCAGCTGACGGTGCA
CTATGATGTGGCGGACGGGAGCGTCAAGTGGATGCCACAGCGACCGCAGG
CCGTGCGGTCCCTCCTTCGCTTCCTAGCCACCCAGGCGGCCAGTTTGCGG
GAATTGAATTTCACGCGTAACGCACATGCCACGCCCACATTTCTCGCACA
ACTGGACGCCCACTTGAAGCGGGCCGGCGGATGTCCATCCCCCCAACTGA
CAAATACGGATGCGGATGTAGAAGCGGATAGGGGTGCGGATGCGGATACG
GCTGAGACAAACGATTTGGCGTTTGTCGAGCTGAAATTGCTGCATTTGCC
TAATGAACAAATGGAAGCGGGCACCGTAGACAGCGATGAGGGATTAGGCC
AAAAGGATAATGGATTGCTGATGTAGAAGCTTTCTAGACCAT

BS28791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:20:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32182-RA 1260 CG32182-PA 1..1260 17..1276 6300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG32182-RA 1442 CG32182-RA 54..1313 17..1276 6300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:20:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17758165..17759424 17..1276 6300 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:20:08 has no hits.

BS28791.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 14:32:03 Download gff for BS28791.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 1..1260 17..1276 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:03 Download gff for BS28791.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 54..1313 17..1276 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:55 Download gff for BS28791.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 54..1313 17..1276 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:55 Download gff for BS28791.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17758165..17759424 17..1276 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:03 Download gff for BS28791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17751265..17752524 17..1276 100   Plus

BS28791.pep Sequence

Translation from 16 to 1275

> BS28791.pep
MRFKTSITIGHGEPPRNRRLMELDDDCLLMICEHLALGDQLRLMEVQEER
FSSLILQLWSNRYAKLFDFRREQQLNLLKPDELAQILDHLGWRTRALINL
PGTGEGCRKWLKRMRQSLNHLQILSFTKSNTLVIQKLPYLCPNVVDLKLG
ECEGLTPLDVDFMFENLKNLREFEMRSSWNCSQQRYQYPRNLEILKLPAC
MITACVSQIFQLPRLRLLTAFLCRNSEHGHLDNDGKANCSGTGTLSACLQ
QIRGRNCRIVGLRLQCRLDDCLPVVDVKEVFRLQSFAWHSQLTVHYDVAD
GSVKWMPQRPQAVRSLLRFLATQAASLRELNFTRNAHATPTFLAQLDAHL
KRAGGCPSPQLTNTDADVEADRGADADTAETNDLAFVELKLLHLPNEQME
AGTVDSDEGLGQKDNGLLM*

BS28791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG32182-PA 419 CG32182-PA 1..419 1..419 2209 100 Plus