BS28809.complete Sequence
362 bp assembled on 2012-04-25
GenBank Submission: KX800202
> BS28809.complete
GAAGTTATCAGTCGACATGGCCGAGCTACTTTTTCCACAACTGGAGCGTC
CTTTGCCCTCGCTGCCATCGCTGCACTACACCCTGTTTGCCTACAGGGAG
GAGTTGCGACGCCGCGATGCCCCGTTCATGAAGATGTCCACCATCAAGCT
GCATCTCACGGACAACCTCATCCTGCAGACGATCAAGAACATCCGGCAGT
ATGACACCATCGAGATTATGAATCTCAACCAGGAGATAAACTTCAAGCGG
CGGCTGACCAAACAAATGAGGAAGGTGCGCAAACTGGAGAAGCTCGGCTT
GCACATCGATCCCCGGAAACTCAACGAGGACGGCAAATGGCACTGAAAGC
TTTCTAGACCAT
BS28809.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:24:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
halo-RB | 330 | CG7428-PB | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:24:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
halo-RB | 616 | CG7428-RB | 88..418 | 17..347 | 1655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:24:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1517731..1518061 | 347..17 | 1655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:24:35 has no hits.
BS28809.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:18:02 Download gff for
BS28809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
halo-RA | 124..452 | 17..345 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:42 Download gff for
BS28809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
halo-RB | 88..416 | 17..345 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:31 Download gff for
BS28809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
halo-RB | 88..416 | 17..345 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:31 Download gff for
BS28809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1517733..1518061 | 17..345 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:42 Download gff for
BS28809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1517733..1518061 | 17..345 | 100 | | Minus |
BS28809.pep Sequence
Translation from 16 to 345
> BS28809.pep
MAELLFPQLERPLPSLPSLHYTLFAYREELRRRDAPFMKMSTIKLHLTDN
LILQTIKNIRQYDTIEIMNLNQEINFKRRLTKQMRKVRKLEKLGLHIDPR
KLNEDGKWH*
BS28809.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
halo-PB | 109 | CG7428-PB | 1..109 | 1..109 | 565 | 100 | Plus |
CG13711-PA | 127 | CG13711-PA | 37..115 | 17..95 | 165 | 32.9 | Plus |
CG13713-PA | 99 | CG13713-PA | 9..81 | 17..89 | 143 | 37 | Plus |
CG13716-PA | 117 | CG13716-PA | 24..94 | 14..84 | 135 | 40.8 | Plus |