BS28902.complete Sequence
614 bp assembled on 2012-04-19
GenBank Submission: KX801921
> BS28902.complete
GAAGTTATCAGTCGACATGGGCTCGTGCTCGTGTACGCGGCGACACTTTT
TGCTGTCAATATGCTTCCTGCAAGTGATAACGATTATCGAGCGCCAGGTA
TTCGACTTCCTCGGCTACATGTGGGCGCCTATCCTAGTGAACTTTTTCCA
CATTTTGTTCATCATATTCGGGTTTTACGGCGCCTACCACTTTCGCGTTA
AATACATCATCACCTATCTAATATGGAACTTCCTGTGGATCGGGTGGAAT
ACCTTCCTCATTTGCTTCTACTTAAATGTGGGGCAGTTGAACAGGGACAG
TGACCTGCTCAACCTGGGCACTGGCAGCGTCTCCTGGTTCGAGGCGAATG
GGTACGGTTGCAAGCCCACCTATAACATGGCCGCGGACGATACGTTCCGT
CCCCAGCGGCCGGAGCGCGTGGAAGGCTGCCTGCTGGACTACCCGCTGGT
GGAGATCACCCACTCGGGGGTACAGTGCGCTCTGGCGCTGCTCGGCATAC
TCGGTGCGATTCTGATTAGTTGCATATTTCTTGACGAGGACGACAGATGT
AAGTGGCGCTCTCTGAATGCGAATAAGAAACATGCTCGCCTGTCATAAAA
GCTTTCTAGACCAT
BS28902.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NKAIN-RI | 582 | CG34413-PI | 1..582 | 17..598 | 2910 | 100 | Plus |
| NKAIN-RL | 600 | CG34413-PL | 1..532 | 17..548 | 2660 | 100 | Plus |
| NKAIN-RJ | 1680 | CG34413-PJ | 1..532 | 17..548 | 2660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NKAIN-RI | 1571 | CG34413-RI | 387..969 | 17..599 | 2915 | 100 | Plus |
| NKAIN-RL | 2366 | CG34413-RL | 387..918 | 17..548 | 2660 | 100 | Plus |
| NKAIN-RJ | 2311 | CG34413-RJ | 387..918 | 17..548 | 2660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:31:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24883420..24883612 | 295..487 | 965 | 100 | Plus |
| 2R | 25286936 | 2R | 24883076..24883214 | 76..214 | 695 | 100 | Plus |
| 2R | 25286936 | 2R | 24883673..24883785 | 487..599 | 565 | 100 | Plus |
| 2R | 25286936 | 2R | 24883278..24883359 | 215..296 | 410 | 100 | Plus |
| 2R | 25286936 | 2R | 24882960..24883019 | 17..76 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:31:11 has no hits.
BS28902.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:14 Download gff for
BS28902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 405..984 | 17..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:06 Download gff for
BS28902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 387..966 | 17..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:51:29 Download gff for
BS28902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 387..966 | 17..596 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:51:29 Download gff for
BS28902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24882960..24883019 | 17..76 | 100 | -> | Plus |
| 2R | 24883077..24883214 | 77..214 | 100 | -> | Plus |
| 2R | 24883278..24883358 | 215..295 | 100 | -> | Plus |
| 2R | 24883421..24883612 | 296..487 | 100 | -> | Plus |
| 2R | 24883674..24883782 | 488..596 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:06 Download gff for
BS28902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20770944..20771135 | 296..487 | 100 | -> | Plus |
| arm_2R | 20770483..20770542 | 17..76 | 100 | -> | Plus |
| arm_2R | 20770600..20770737 | 77..214 | 100 | -> | Plus |
| arm_2R | 20770801..20770881 | 215..295 | 100 | -> | Plus |
| arm_2R | 20771197..20771305 | 488..596 | 100 | | Plus |
BS28902.pep Sequence
Translation from 16 to 597
> BS28902.pep
MGSCSCTRRHFLLSICFLQVITIIERQVFDFLGYMWAPILVNFFHILFII
FGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICFYLNVGQLNRDSDLLNL
GTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLDYPLVEITHS
GVQCALALLGILGAILISCIFLDEDDRCKWRSLNANKKHARLS*
BS28902.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NKAIN-PI | 193 | CG34413-PI | 1..193 | 1..193 | 1057 | 100 | Plus |
| NKAIN-PJ | 559 | CG34413-PJ | 1..179 | 1..179 | 972 | 99.4 | Plus |
| NKAIN-PL | 199 | CG34413-PL | 1..177 | 1..177 | 968 | 100 | Plus |
| NKAIN-PH | 658 | CG34413-PH | 1..177 | 1..177 | 968 | 100 | Plus |
| NKAIN-PG | 658 | CG34413-PG | 1..177 | 1..177 | 968 | 100 | Plus |
