BS28913.complete Sequence
356 bp assembled on 2012-04-19
GenBank Submission: KX801666
> BS28913.complete
GAAGTTATCAGTCGACATGTGCCTCCTGCCCGGTCGCTTCTTCTGGTCAG
CTTTCATTGTGACGATGGTGGGTCTATCCGCAACGATCGAAGCTAGACCC
CAGAGGAATCTGCAGCACATCGCCGTGGTGGAGAATGCCGCCTGGGAAAA
GACCCTTCCGCAGCAGTTCCAGAACCCCTTCTACAATACCCCAAGGGTGA
GAGATGCCCTGGCCAGATCCAGTTGGTTTGGACCCGGCGAGGAGGTGGTT
TATGACCGCCAGGCTGAAAAAATTCCTCGCATGGAAATCTACAATGTGTT
GTCTCATGCTGGTTTGATACCACGCCGGCGTTTTCTTTAAAAGCTTTCTA
GACCAT
BS28913.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:31:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14397-RA | 324 | CG14397-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14397-RA | 533 | CG14397-RA | 141..465 | 17..341 | 1625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:31:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21094409..21094639 | 19..249 | 1155 | 100 | Plus |
2L | 23513712 | 2L | 21094702..21094796 | 247..341 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:31:46 has no hits.
BS28913.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:19 Download gff for
BS28913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14397-RA | 127..448 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:17 Download gff for
BS28913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14397-RA | 141..462 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:51:39 Download gff for
BS28913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14397-RA | 141..462 | 17..338 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:51:39 Download gff for
BS28913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21094407..21094637 | 17..247 | 99 | -> | Plus |
2L | 21094703..21094793 | 248..338 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:17 Download gff for
BS28913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21094703..21094793 | 248..338 | 100 | | Plus |
arm_2L | 21094407..21094637 | 17..247 | 99 | -> | Plus |
BS28913.pep Sequence
Translation from 16 to 339
> BS28913.pep
MCLLPGRFFWSAFIVTMVGLSATIEARPQRNLQHIAVVENAAWEKTLPQQ
FQNPFYNTPRVRDALARSSWFGPGEEVVYDRQAEKIPRMEIYNVLSHAGL
IPRRRFL*
BS28913.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14397-PA | 107 | CG14397-PA | 1..107 | 1..107 | 566 | 100 | Plus |